G299173



Basic Information


Item Value
gene id G299173
gene name NA
gene type unknown
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000086
NCBI id null
chromosome length 2920448
location 765617 ~ 767879 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>TU339629
GTAACTACGCCACCTTAAAATAAAGTGCTACCATTGTTTGTTTGTTTTTTTCTTCTTTCAAGATAAATCTTAAACAAGAAAAAGCACTTTACCAACGGGGTCTGTAAAATAAACTTCAAGTCCTCTAAAAACATGTCATAGTATATCTTATGTGATTTCAAGTAAATTTATCTTGCTTTAAGTAGATTTCGATGTTTTTGCTGTAAAACAAGGCAAAAGCACAGACTAAGATAGAGGATATCTGCACACCTTCTCTGCTCAGTCTCTAAAGCATGTCGCGCGTTCATCTGTTTAAGGAGCGCACAAGTGTTTTCTGTCAGTCTAAGTGACCCATTTATTTCGGTGGAGGGCTGTCTTGTTCCTCGCGTTCATGCTAATGACTGAGGGGGGAAGGTTGGTGACTCATATGTTTAACAGCACTGTCAATATCCTCTCATTTTTAAGCCCCCGCATTTTCCCTCTCTATTCTCTAACACTCGTCTATCTCTCGCCGTCATTTCTGCCTCCGCTCAATCAATACAGGTCAGCAATAATGTATGAGTCAAGCCAGGCTTCTCCACTCCCGTCTTTCCCTCTGTACGTTGCTAAAGTTAAACACCGTGCTTCCGTTTTGTACCTTTATGCATTTCCCCGAAACCACCTGGATGTATTTCTAGACATCATATTTATTCCTGCAGCCCGAAGCGCCGCGAGGGAAAATCTGGAAATTATTTTCCATCTGTGTTTAACTCGACTCTCCCTCTCTTTCTTCTCAGCTAACAAATGTATTTCTAAAATCATTCTGCTCCATTTTGGTTGGAGGACTGTTAAAATGTCGAGTTTTCTTGAACGTCATTCATGCGCTTGTGATGTTCATCGAATAATAACATAAATTTCAAACTTTATGACACACGTTGCACTATACTTGCAGAGTTTGTGTCATTTTTTGGAGCTCGACAGCCGCTGAACTCATTCACATCCACTGCATGGAAAAATAACAGAATGAAATAACATGAAAATGGACAAACCCAGTTGGGTTATTTTTAACCCAGAATTTTTTAGAGTGTACACTACCATTAAAAGGTTTGAGGTCAGTAAAATTTTTCTTTTCTTTCTTCTTTTTTAAATCTGCCCACCAAAGCTGCATTTATTTGATCAAAAATACAGTAAAAATCTGAAATATTATTACTATTTAAAATAAGTGTTTTCTATTGTAATCTATTGTAAAATGTAATTTATTCCTGTGATGCAAAGTTGAATTTTCAGCTTTGCATCACATGATCCTTCAGAAAGACAATGGAGAACTATTCCGTCTGTTCCTAACATTTACACAAACTTTACATAACATGAACCAAATATTTCAGAGCGTTCCTTCTTCCAGACTTCTTCATCGCATCTCTTTCTCTCCTGC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU339629 True 1390 TUCP 0.38 3 765617 767879

Neighbor


gene id symbol gene type direction distance location
CI01000086_00587995_00596565 BRAFLDRAFT_115002, ETFB, ETFB.L coding downstream 168878 587765 ~ 596739 (-)
CI01000086_00582697_00586449 VSIG10L coding downstream 179168 582697 ~ 586449 (-)
CI01000086_00573050_00574400 LIM2, LIM2.4, MGC84384, LIM2.L, LIM2.5 coding downstream 191217 572965 ~ 574400 (-)
CI01000086_00544490_00561333 NEK10 coding downstream 201433 544150 ~ 564184 (-)
CI01000086_00519578_00523117 NA coding downstream 241140 519490 ~ 524477 (-)
CI01000086_00935341_00936321 NA coding upstream 167173 935052 ~ 939188 (-)
CI01000086_00949574_00963179 NA coding upstream 180147 948026 ~ 963260 (-)
CI01000086_00978789_00999074 NA coding upstream 210661 978540 ~ 999740 (-)
CI01000086_01005334_01006342 NA coding upstream 236705 1004584 ~ 1006342 (-)
CI01000086_01069219_01094068 AGO3, EIF2C3, I2C3 coding upstream 301128 1061523 ~ 1094251 (-)
G299096 NA non-coding downstream 39224 694096 ~ 726393 (-)
G299049 NA non-coding downstream 133291 629721 ~ 632326 (-)
CI01000086_00394709_00423259 NA non-coding downstream 331066 393499 ~ 423259 (-)
G298888 NA non-coding downstream 356368 407738 ~ 409249 (-)
G298990 NA non-coding downstream 439045 326346 ~ 326572 (-)
G299218 NA non-coding upstream 75861 843740 ~ 844179 (-)
G299221 NA non-coding upstream 85725 853604 ~ 876168 (-)
G299266 NA non-coding upstream 234386 1002265 ~ 1002619 (-)
G299119 NA non-coding upstream 268157 1036036 ~ 1044620 (-)
G299128 NA non-coding upstream 291125 1059004 ~ 1060093 (-)
G298872 NA other downstream 229307 535023 ~ 536310 (-)
G299107 NA other upstream 308267 1126738 ~ 1126798 (-)
CI01000086_01257926_01260025 SERPINB1L4, SERPINB14 other upstream 491135 1257926 ~ 1260025 (-)
G299528 NA other upstream 900327 1668206 ~ 1695177 (-)
CI01000086_01852638_01897719 UBR5 other upstream 1126035 1852146 ~ 1897719 (-)
CI01000086_02366362_02373059 SLC6A20 other upstream 1596452 2364331 ~ 2373059 (-)

Expression



Co-expression Network