Gene
RNA
| Item | Value |
|---|---|
| gene id | G299221 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000086 |
| NCBI id | null |
| chromosome length | 2920448 |
| location | 853604 ~ 876168 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU339677 | True | 223 | lncRNA | 0.43 | 2 | 853604 | 876168 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000086_00587995_00596565 | BRAFLDRAFT_115002, ETFB, ETFB.L | coding | downstream | 256865 | 587765 ~ 596739 (-) |
| CI01000086_00582697_00586449 | VSIG10L | coding | downstream | 267155 | 582697 ~ 586449 (-) |
| CI01000086_00573050_00574400 | LIM2, LIM2.4, MGC84384, LIM2.L, LIM2.5 | coding | downstream | 279204 | 572965 ~ 574400 (-) |
| CI01000086_00544490_00561333 | NEK10 | coding | downstream | 289420 | 544150 ~ 564184 (-) |
| CI01000086_00519578_00523117 | NA | coding | downstream | 329127 | 519490 ~ 524477 (-) |
| CI01000086_00935341_00936321 | NA | coding | upstream | 58884 | 935052 ~ 939188 (-) |
| CI01000086_00949574_00963179 | NA | coding | upstream | 71858 | 948026 ~ 963260 (-) |
| CI01000086_00978789_00999074 | NA | coding | upstream | 102372 | 978540 ~ 999740 (-) |
| CI01000086_01005334_01006342 | NA | coding | upstream | 128416 | 1004584 ~ 1006342 (-) |
| CI01000086_01069219_01094068 | AGO3, EIF2C3, I2C3 | coding | upstream | 192839 | 1061523 ~ 1094251 (-) |
| G299218 | NA | non-coding | downstream | 9425 | 843740 ~ 844179 (-) |
| G299096 | NA | non-coding | downstream | 127211 | 694096 ~ 726393 (-) |
| G299049 | NA | non-coding | downstream | 221278 | 629721 ~ 632326 (-) |
| CI01000086_00394709_00423259 | NA | non-coding | downstream | 419053 | 393499 ~ 423259 (-) |
| G298888 | NA | non-coding | downstream | 444355 | 407738 ~ 409249 (-) |
| G299266 | NA | non-coding | upstream | 126097 | 1002265 ~ 1002619 (-) |
| G299119 | NA | non-coding | upstream | 159868 | 1036036 ~ 1044620 (-) |
| G299128 | NA | non-coding | upstream | 182836 | 1059004 ~ 1060093 (-) |
| G299283 | NA | non-coding | upstream | 301649 | 1177817 ~ 1237208 (-) |
| G299173 | NA | other | downstream | 85725 | 765617 ~ 767879 (-) |
| G298872 | NA | other | downstream | 317294 | 535023 ~ 536310 (-) |
| G299107 | NA | other | upstream | 199978 | 1126738 ~ 1126798 (-) |
| CI01000086_01257926_01260025 | SERPINB1L4, SERPINB14 | other | upstream | 382846 | 1257926 ~ 1260025 (-) |
| G299528 | NA | other | upstream | 792038 | 1668206 ~ 1695177 (-) |
| CI01000086_01852638_01897719 | UBR5 | other | upstream | 1017746 | 1852146 ~ 1897719 (-) |
| CI01000086_02366362_02373059 | SLC6A20 | other | upstream | 1488163 | 2364331 ~ 2373059 (-) |
