G298280


Basic Information

Item Value
gene id G298280
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000086
NCBI id null
chromosome length 2920448
location 893327 ~ 894116 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU338637
CACCAAACAGAATTGCAAACACAACTAGAAAAGAAAAAGTTCATCACATGAATTTTAGTTTGAAGTGTGAAGGTTATATAAGTTTCAGTACTGAAGAGAGGTGTGAAGTGTGAAGGTTATATAATGTCTGTGGAGTTTGACAGCAGGCTTTAAATAGGCTGTGTACTGATACATGGTTGTTGTAGTTTTGTGTGCAGTTGTTAAGGTATTGTGAGAGGATACTAAACATCTAAATATCAAGATAAGCTGTGTCTCATTTCGAAGGTTGCATCCTCCGGAGATCGCATTTGTCAGCTGCATACGTCACAGCATATAGTTAGACAAAAAGTGTAAAAGTGTATACTAGATAATGTGAAATGTAAATATAAAGGTTTATATTTAAAGGGGTCATGAACTGCGTTGTTTTATTGTTTTAAAATGTTTCCTGGGGTGCACTTATAATGTTAGTATGCTTTTTACATCAAAAATTGTCAAAAGCTTGAAATAAAAGGCATTTTTCCTACACTGTAAACGCCCACTGCTGTGATTGGCTAACATCTTTGCATATAAAATAGATAAGTATTACTCTCTCGAAAACTTTTAGCACATTTTTACTATTACAGCTCTCAAGGTTAACTAATCGTGAAAAGTGTTGATTATAGCATTACATTTAGATCTATGGCATTATATTTCGATCGTGGCATGAAAGGTTGCAGTGATGAACATTGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU338637 True 708 lncRNA 0.34 2 893327 894116

Neighbor

gene id symbol gene type direction distance location
CI01000086_00702140_00704803 NA coding upstream 187594 702076 ~ 705733 (+)
CI01000086_00629905_00632087 NA coding upstream 260917 629765 ~ 632433 (+)
CI01000086_00603554_00613149 USF2 coding upstream 279857 603554 ~ 613470 (+)
CI01000086_00598327_00599803 NA coding upstream 293432 598327 ~ 599895 (+)
CI01000086_00569583_00570500 NA coding upstream 322827 569531 ~ 570500 (+)
CI01000086_01030611_01038651 NA coding downstream 136155 1030271 ~ 1038748 (+)
CI01000086_01044588_01047516 NA coding downstream 150353 1044469 ~ 1047601 (+)
CI01000086_01053732_01056868 NA coding downstream 159241 1053357 ~ 1057119 (+)
CI01000086_01098078_01098642 NA coding downstream 203819 1097935 ~ 1098805 (+)
CI01000086_01150842_01165271 DHDDS coding downstream 256726 1150842 ~ 1165922 (+)
G298279 NA non-coding upstream 17301 875681 ~ 876026 (+)
G298266 NA non-coding upstream 72280 818668 ~ 821047 (+)
G298215 NA non-coding upstream 75394 806149 ~ 817933 (+)
G298233 NA non-coding upstream 96096 792102 ~ 797231 (+)
G298212 NA non-coding upstream 107065 763228 ~ 786262 (+)
G298290 NA non-coding downstream 51982 946098 ~ 946339 (+)
G298207 NA non-coding downstream 167366 1061482 ~ 1115384 (+)
G298363 NA non-coding downstream 228984 1123100 ~ 1126798 (+)
G298366 NA non-coding downstream 244331 1136660 ~ 1147867 (+)
CI01000086_00499939_00501377 NA other upstream 391211 498625 ~ 502116 (+)
G298208 NA other downstream 53075 947191 ~ 980110 (+)
G298381 NA other downstream 278040 1172156 ~ 1176916 (+)
G298529 NA other downstream 982774 1876890 ~ 1881453 (+)

Expression


Co-expression Network