G298290


Basic Information

Item Value
gene id G298290
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000086
NCBI id null
chromosome length 2920448
location 946098 ~ 946339 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU338647
GAAACTTTAAAAAACTGATTCTGCTCAGAGTGAACAGATTGAATTTTTTTTTGTTTTGAAACCCTGCAAAGAAGCCAACAGAACTTCAAAAGGGGTTAAGGCCAACATAACAAACAAAACATTTACTAACTCCCAAAAACAATCTACATAAAGTAACAAAATAAAAATAAAAAGAACTACTGAAAAATACAGGTAAAAAAAAAAGAAAAAAAAAGAAAAAAAGAAAATGGCAACCACCTCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU338647 True 242 lncRNA 0.29 1 946098 946339

Neighbor

gene id symbol gene type direction distance location
CI01000086_00877464_00899432 IGLON5 coding upstream 46606 877464 ~ 899492 (+)
CI01000086_00702140_00704803 NA coding upstream 240365 702076 ~ 705733 (+)
CI01000086_00629905_00632087 NA coding upstream 313688 629765 ~ 632433 (+)
CI01000086_00603554_00613149 USF2 coding upstream 332628 603554 ~ 613470 (+)
CI01000086_00598327_00599803 NA coding upstream 346203 598327 ~ 599895 (+)
CI01000086_01030611_01038651 NA coding downstream 83932 1030271 ~ 1038748 (+)
CI01000086_01044588_01047516 NA coding downstream 98130 1044469 ~ 1047601 (+)
CI01000086_01053732_01056868 NA coding downstream 107018 1053357 ~ 1057119 (+)
CI01000086_01098078_01098642 NA coding downstream 151596 1097935 ~ 1098805 (+)
CI01000086_01150842_01165271 DHDDS coding downstream 204503 1150842 ~ 1165922 (+)
G298164 NA non-coding upstream 40244 495230 ~ 905854 (+)
G298280 NA non-coding upstream 51982 893327 ~ 894116 (+)
G298279 NA non-coding upstream 70072 875681 ~ 876026 (+)
G298266 NA non-coding upstream 125051 818668 ~ 821047 (+)
G298215 NA non-coding upstream 128165 806149 ~ 817933 (+)
G298207 NA non-coding downstream 115143 1061482 ~ 1115384 (+)
G298363 NA non-coding downstream 176761 1123100 ~ 1126798 (+)
G298366 NA non-coding downstream 192108 1136660 ~ 1147867 (+)
G298377 NA non-coding downstream 198941 1145280 ~ 1145556 (+)
CI01000086_00499939_00501377 NA other upstream 443982 498625 ~ 502116 (+)
G298208 NA other downstream 852 947191 ~ 980110 (+)
G298381 NA other downstream 225817 1172156 ~ 1176916 (+)
G298529 NA other downstream 930551 1876890 ~ 1881453 (+)

Expression


Co-expression Network