G298366


Basic Information

Item Value
gene id G298366
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000086
NCBI id null
chromosome length 2920448
location 1136660 ~ 1147867 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU338741
ATCCATCCAAAATGTATCAAATACCGTGACATTCCATGTTATACAGTAAACTCCATTTTCATGACCAGATTCTGCGATTCATTTTCTGCATTATGGAAATCATAGGGCCAGAATGCCTGAGCCCTGTAAGTCCATGACCAGCGTACCTCATGGAGGCCAGGTGTCTCATGGCCACATCGAGGGCTTGGACAGAGTCCAGCGGGACCTGTAGACGTCCGCTGACCAGCGTCTCCTGCAGCAGCCTCCACGACACCTTGGCCAGCCAACGAATGGACACTTTAAAGATGCGATCTTTCCCTTCTCCAGGGATGGTCACCTCGAAGTCAACCTTTTCGCTGCCTATAGGTAACGCTAAAACAGTGTAGATATTCTTCTTCCCATCGTACACTGGCTTTCGGTCACCAAAGAGCTGTGGTTTGAAATGTTGGACCATGTATTCCACAACCTCCCTGTTGACCCTCCGAGGACACTTATCAGGTTTGATGTCCACTTCATAGTGGTACACATCCATTTTTGGGATCTCCACCTCAAAGTAGTTGGCAAGCAGCTTGATGGGTTTGCCGACGGTGCCCATGCCCGGCCTGCGGGGCGCCTGGAACACCTGCTGCAGGGGTGGGGGGTACGGCCCGATGGGCACAGCGCCAGATGGTCCCGGCTCCATCCCATCCACTGAGCCACAAAGGGTTCACCAAAGTCCCGATGCTCAATCGCCACGGCGCCCGGCCCTTCAGGCTGGAAGCGTCCCCGACTTCCAGCCTCCTTCCCTGGGCGAGCGGGATCGTCTCCGCCGCCGCTGCTGGAGCCCCCAAACCCGCAGGAGTTGAGAGAGAAACAAAAGCTCCTTAGTTCCGATCCCGAATGACCCTCTCCTCCGGGCTCTTTCCGTCCGTGGCTGGATGCTGCGGGTCGGGCTGCTCTGGTTCGGGTTGTTGTGCCTCCTGCTCACCGTTCAAGCAGGATCCACCAGCGGAACAAAAACGTTCAACCCGTCCGTCAGTCACTCACCCCCCACAGCCCGAGAGCCCGTTTCTTCTTCTTC
>TU338740
TATAATTCCTAAGGAATGACTGTGGATCTTTGAGGTGCCGGGGCATTTACCTGTTGACCCTCCGAGGACACTTATCAGGTTTGATGTCCACTTCATAGTGGTACACATCCATTTTTGGGATCTCCACCTCAAAGTAGTTGGCAAGCAGCTTGATGGGTTTGCCGACGGTGCCCATGCCCGGCCTGCGGGGCGCCTGGAACACCTGCTGCAGGGGTGGGGGGTACGGCCCGATGGGCACTGCGGACAGCGCCAGATGGTCCCGGCTCCATCCCATCCACTGAGCCACAAAGGGTTCACCAAAGTCCCGATGCTCAATCGCCACGGCGCCCGGCCCTTCAGGCTGGAAGCGTCCCCGACTTCCAGCCTCCTTCCCTGGGCGAGCGGGATCGTCTCCGCCGCCGCTGCTGGAGCCCCCAAACCCGCAGGAGTTGAGAGAGAAACAAAAGCTCCTTAGTTCCGATCCCGAATGACCCTCTCCTCCGGGCTCTTTCCGTCCGTGGCTGGATGCTGCGGGTCGGGCTGCTCTGGTTCGGGTTGTTGTGCCTCCTGCTCACCGTTCAAGCAGGATCCACCAGCGGAACAAAAACGTTCAACCCGTCCGTCAGTCACTCACCCCCCACAGCCCGAGAGCCCGTTTCTTCTTCTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU338741 False 1039 TUCP 0.56 4 1136660 1147867
TU338740 True 647 lncRNA 0.60 2 1138447 1147867

Neighbor

gene id symbol gene type direction distance location
CI01000086_01098078_01098642 NA coding upstream 39642 1097935 ~ 1098805 (+)
CI01000086_01053732_01056868 NA coding upstream 81328 1053357 ~ 1057119 (+)
CI01000086_01044588_01047516 NA coding upstream 90846 1044469 ~ 1047601 (+)
CI01000086_01030611_01038651 NA coding upstream 99776 1030271 ~ 1038748 (+)
CI01000086_00877464_00899432 IGLON5 coding upstream 238955 877464 ~ 899492 (+)
CI01000086_01150842_01165271 DHDDS coding downstream 2975 1150842 ~ 1165922 (+)
CI01000086_01265644_01273085 NA coding downstream 117497 1265364 ~ 1273446 (+)
CI01000086_01371003_01393249 SLC9A1 coding downstream 223136 1371003 ~ 1393807 (+)
CI01000086_01413340_01416793 MAN1C1 coding downstream 265428 1413295 ~ 1416815 (+)
CI01000086_01492811_01493179 NA coding downstream 344944 1492811 ~ 1494000 (+)
G298363 NA non-coding upstream 11649 1123100 ~ 1126798 (+)
G298207 NA non-coding upstream 23063 1061482 ~ 1115384 (+)
G298290 NA non-coding upstream 192108 946098 ~ 946339 (+)
G298280 NA non-coding upstream 244331 893327 ~ 894116 (+)
G298382 NA non-coding downstream 31296 1179163 ~ 1184457 (+)
G298386 NA non-coding downstream 40541 1188408 ~ 1224346 (+)
G298413 NA non-coding downstream 81163 1229030 ~ 1229434 (+)
G298391 NA non-coding downstream 90054 1237921 ~ 1260638 (+)
G298214 NA non-coding downstream 271575 1419442 ~ 1427548 (+)
G298208 NA other upstream 158337 947191 ~ 980110 (+)
CI01000086_00499939_00501377 NA other upstream 636331 498625 ~ 502116 (+)
G298381 NA other downstream 24289 1172156 ~ 1176916 (+)
G298529 NA other downstream 729023 1876890 ~ 1881453 (+)
CI01000086_02807666_02845401 PHLDB3, ETHE1 other downstream 1659716 2806368 ~ 2845762 (+)

Expression


Co-expression Network