G298386


Basic Information

Item Value
gene id G298386
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000086
NCBI id null
chromosome length 2920448
location 1188408 ~ 1224346 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU338768
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGAAACCAGTTTTCATTGAGTTTCGACTTACAACATGCTCAGGCACCAGAGCACAGTTTATTTGTAACAGCAGGTTCAAAAAAATTTAAAAAAAAATTCAATTTTAATTATAAAGATTTGTTTCATTTATGTTGAATATATTGTCCAGCATGTGCATGTAAAGAGAGAAAAATGTCCATTTTAGTATCATTGATATACTATTATAGTTTTTGTTAATATTTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU338768 True 259 lncRNA 0.23 2 1188408 1224346

Neighbor

gene id symbol gene type direction distance location
CI01000086_01150842_01165271 DHDDS coding upstream 22652 1150842 ~ 1165922 (+)
CI01000086_01098078_01098642 NA coding upstream 89603 1097935 ~ 1098805 (+)
CI01000086_01053732_01056868 NA coding upstream 131289 1053357 ~ 1057119 (+)
CI01000086_01044588_01047516 NA coding upstream 140807 1044469 ~ 1047601 (+)
CI01000086_01030611_01038651 NA coding upstream 149737 1030271 ~ 1038748 (+)
CI01000086_01265644_01273085 NA coding downstream 41018 1265364 ~ 1273446 (+)
CI01000086_01371003_01393249 SLC9A1 coding downstream 146657 1371003 ~ 1393807 (+)
CI01000086_01413340_01416793 MAN1C1 coding downstream 188949 1413295 ~ 1416815 (+)
CI01000086_01492811_01493179 NA coding downstream 268465 1492811 ~ 1494000 (+)
CI01000086_01506402_01526965 NA coding downstream 281913 1506259 ~ 1527057 (+)
G298382 NA non-coding upstream 3951 1179163 ~ 1184457 (+)
G298366 NA non-coding upstream 40541 1136660 ~ 1147867 (+)
G298377 NA non-coding upstream 42852 1145280 ~ 1145556 (+)
G298363 NA non-coding upstream 61610 1123100 ~ 1126798 (+)
G298207 NA non-coding upstream 73024 1061482 ~ 1115384 (+)
G298413 NA non-coding downstream 4684 1229030 ~ 1229434 (+)
G298391 NA non-coding downstream 13575 1237921 ~ 1260638 (+)
G298214 NA non-coding downstream 195096 1419442 ~ 1427548 (+)
G298234 NA non-coding downstream 258095 1482441 ~ 1486554 (+)
CI01000086_01546688_01584240 NA non-coding downstream 359216 1546176 ~ 1589583 (+)
G298381 NA other upstream 11492 1172156 ~ 1176916 (+)
G298208 NA other upstream 208298 947191 ~ 980110 (+)
CI01000086_00499939_00501377 NA other upstream 686292 498625 ~ 502116 (+)
G298529 NA other downstream 652544 1876890 ~ 1881453 (+)
CI01000086_02807666_02845401 PHLDB3, ETHE1 other downstream 1583237 2806368 ~ 2845762 (+)

Expression


Co-expression Network