G298391


Basic Information

Item Value
gene id G298391
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000086
NCBI id null
chromosome length 2920448
location 1237921 ~ 1260638 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU338774
AGAGGAACACAGTCATCTAGAATGATCACTTTATCATCACATTCTTCAAGGAGAACAGAAGCGTCCATAGAACAGAATGGCATTGGAGGGATTATGCCGGATGAAGAAAAGGAACGGGTGGTCTGCGTTGAACATCTGTGCAAATGAACGTACTGCAACAACAGCACCGGTGGCTGCAGCCGCTTCGGTTCCTTCCTCGTTTACTTCAACAAAGGCTTTATGAATCACCTTCGACAGCACCAGGTCGTTGTTGGAGGACATGCCTGAAAGATTCACCTTCTGCGTGTCAAAAACATCCTCCATTCCCATGCTGATCAGAAGACTCTTCATGTCATATTTTTCCTCCATCTTGAATCTGGGCAGAGATACTTGAACTTCTTGTTGACGCATGTTGCTGGGTTTGGTCCACTCCATGAGCTTCTCGTAGGAAGGATGATCAACATACTGAGATTCTTCCCAACATACGGCAGCTCCAGAACCTGACTGTTCATCTCTGGGATGAAGGCCAGAGGAAACTGCGCCTTTTGATGCATCATCTTCACTGGTTTAGTTTGATTCTGGTTCATCTTAAACTGCCTGTCTCTAGTGGCGTCTTTTGGGAATTTCTTCTCCCAGTTCCCCTTGAAGTAGATGGCGTTAACCAAGACCAGTCTCGTCATCGCATCAACAGCTCCCTGTGGCAGCAAGTCCTTGATCTTCTCTTGTGTTTTTTTCTCCACCCATTTATTGATGTTGACACGAGCAGCCTCTGATTTGGTCTTGAAGTCCACCGCCTCCAGTCCAGCTTCATAGTATCTTTTTGCATCATTGAGGAATTTCTCAACAAACTGGTAGGACTGCTCTCCATAGAGGCGGTTGGCAACACTCAACACATACGGGACTCCTGGTTTGTTCAGCTCACTCATAAACTTGTTGAAGCTCAAATGAATTTGGTCCTCAGTTTTTGGTCCAGGTACTGGCTGAGCAGGACATTTCTTGAGTTCGGCAGGTATCTCAAACTTCTGGGTTTGTTGCATCATTGATGGATCATGTTGACCCTTGACGCCACATGTTATCTGGGGCTTCTGGGTGTGTTGTTGAGGTGCTGGAGTCGCAGCGTTGGGTTTGGGAGGATTGTTAAAGCCCAGGACCTTAATCATCTGAGCTGCTGTGTTTCCTCTTGCACCGAGCGACACCATGGCCAGAGCCGAGGAGATGCTGACAGGAGAGTAGAACACATTTCCTGATNNN

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU338774 True 1230 lncRNA 0.47 8 1237921 1260638

Neighbor

gene id symbol gene type direction distance location
CI01000086_01150842_01165271 DHDDS coding upstream 72165 1150842 ~ 1165922 (+)
CI01000086_01098078_01098642 NA coding upstream 139116 1097935 ~ 1098805 (+)
CI01000086_01053732_01056868 NA coding upstream 180802 1053357 ~ 1057119 (+)
CI01000086_01044588_01047516 NA coding upstream 190320 1044469 ~ 1047601 (+)
CI01000086_01030611_01038651 NA coding upstream 199250 1030271 ~ 1038748 (+)
CI01000086_01265644_01273085 NA coding downstream 4726 1265364 ~ 1273446 (+)
CI01000086_01371003_01393249 SLC9A1 coding downstream 110365 1371003 ~ 1393807 (+)
CI01000086_01413340_01416793 MAN1C1 coding downstream 152657 1413295 ~ 1416815 (+)
CI01000086_01492811_01493179 NA coding downstream 232173 1492811 ~ 1494000 (+)
CI01000086_01506402_01526965 NA coding downstream 245621 1506259 ~ 1527057 (+)
G298413 NA non-coding upstream 8487 1229030 ~ 1229434 (+)
G298386 NA non-coding upstream 13575 1188408 ~ 1224346 (+)
G298382 NA non-coding upstream 53464 1179163 ~ 1184457 (+)
G298366 NA non-coding upstream 90054 1136660 ~ 1147867 (+)
G298377 NA non-coding upstream 92365 1145280 ~ 1145556 (+)
G298214 NA non-coding downstream 158804 1419442 ~ 1427548 (+)
G298234 NA non-coding downstream 221803 1482441 ~ 1486554 (+)
CI01000086_01546688_01584240 NA non-coding downstream 322924 1546176 ~ 1589583 (+)
G298472 NA non-coding downstream 394912 1655550 ~ 1656075 (+)
G298485 NA non-coding downstream 407574 1668212 ~ 1695255 (+)
G298381 NA other upstream 61005 1172156 ~ 1176916 (+)
G298208 NA other upstream 257811 947191 ~ 980110 (+)
CI01000086_00499939_00501377 NA other upstream 735805 498625 ~ 502116 (+)
G298529 NA other downstream 616252 1876890 ~ 1881453 (+)
CI01000086_02807666_02845401 PHLDB3, ETHE1 other downstream 1546945 2806368 ~ 2845762 (+)

Expression


Co-expression Network