G299321


Basic Information

Item Value
gene id G299321
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000086
NCBI id null
chromosome length 2920448
location 1353406 ~ 1354349 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU339797
AGGAAGCCAGCAGAACCCATAATGAAATCTCAAAGGGCAGCCGAACAGTGTCATAATCAAATGACAGAACCGGGAAGGGCTTCTTGGAATGAGTGCTGTTGTGTCCCATGTCTCTGTGTTCGTGGTTATTCTGGGACACCCCGGTGTCCATGGCTGGAGAGCTGGCGGCCCCTTCGAGGGGCATCAAACTGCCCACCAGGAACCCCAAGACAATGATGAACATCTTGAGCTCCATGATAGTTGTGCGTTTTAAAAGATGAGAGAATGACACGATATTATCTGACCAACTCTGTCGATGCTTTAACTAGCTCTATAATGAAGTTTCTTTTTAACCTACTAGATAATTCCTGGATCATTTTCTGACTTCGGATTGACTGAAATCTAAAAGGCTCTTGGGTTTCCTACTTCCTGGCTTCTGTAAAACACTTAAACACCCTCTCCAGGTGAAGACAGAGAAAACCAGGAAATATAGACAGGTGTGTGTGTGAATATACCTGCATATAGACCAGGAAATATATGCGGGTATGTGTTCCCTCAAGGCGCTACACTAAAAGGTAGAACTGATGTTCATTTTCTTCCTCCTCTAACATCACCATCATCAGCCCCTCAGAAACACAGCACGGAAAAAGGACACTCAATGACAACTCCAAAACAGTCCTCATCGATACAGTCCAAAGGCACCAATCACGTTTTCTTCATGTTGCTCGTTTGCTCTTCTGATAATATCACAATCTGTCCTGTCCCGATACAGACGACAGGAAAAGTCGCTTCAACTACGAAAGACGTTGCTGTATTCGTGGTAGCGTCAGGCGGGCTTTTCAGCGCTCCTTAAAGAACTTATTCGATGTCCTTTAGCGATACGACTGATCATTTCACACACACCATCTCTTTTTCCCATGTCTGCAGTGCGTGATGCAGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU339797 True 920 lncRNA 0.45 2 1353406 1354349

Neighbor

gene id symbol gene type direction distance location
CI01000086_01313364_01320865 NA coding downstream 31392 1313022 ~ 1322014 (-)
CI01000086_01296658_01297947 NA coding downstream 55347 1295830 ~ 1298059 (-)
CI01000086_01257926_01260025 SERPINB1L4, SERPINB14 coding downstream 93381 1257926 ~ 1260025 (-)
CI01000086_01237966_01253245 NA coding downstream 100118 1237911 ~ 1253288 (-)
CI01000086_01193934_01219331 NA coding downstream 133966 1193715 ~ 1219440 (-)
CI01000086_01670242_01672517 NA coding upstream 315439 1669788 ~ 1674496 (-)
CI01000086_01852638_01897719 UBR5 coding upstream 497797 1852146 ~ 1897719 (-)
CI01000086_01915013_01921794 AZIN1A coding upstream 560664 1915013 ~ 1921794 (-)
CI01000086_01948087_01983560 SPIRE1 coding upstream 593658 1948007 ~ 1983560 (-)
CI01000086_01994840_02008387 TPPP coding upstream 640246 1994595 ~ 2008387 (-)
G299331 NA non-coding downstream 6526 1341443 ~ 1346880 (-)
G299283 NA non-coding downstream 116198 1177817 ~ 1237208 (-)
G299299 NA non-coding downstream 122270 1228921 ~ 1231136 (-)
CI01000086_01069219_01094068 AGO3, EIF2C3, I2C3 non-coding downstream 280742 1061523 ~ 1094251 (-)
G299128 NA non-coding downstream 293313 1059004 ~ 1060093 (-)
G299322 NA non-coding upstream 16662 1371011 ~ 1373189 (-)
G299323 NA non-coding upstream 26842 1381191 ~ 1385500 (-)
G299345 NA non-coding upstream 46586 1400935 ~ 1401281 (-)
G299348 NA non-coding upstream 49338 1403687 ~ 1404260 (-)
G299351 NA non-coding upstream 55189 1409538 ~ 1409853 (-)
G299107 NA other downstream 226608 1126738 ~ 1126798 (-)
G299173 NA other downstream 585527 765617 ~ 767879 (-)
CI01000086_00587995_00596565 BRAFLDRAFT_115002, ETFB, ETFB.L other downstream 756777 587765 ~ 596739 (-)
G298872 NA other downstream 817096 535023 ~ 536310 (-)
G299528 NA other upstream 313857 1668206 ~ 1695177 (-)
CI01000086_02366362_02373059 SLC6A20 other upstream 1009982 2364331 ~ 2373059 (-)
G299598 NA other upstream 1511333 2865682 ~ 2868103 (-)

Expression


Co-expression Network