G299322


Basic Information

Item Value
gene id G299322
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000086
NCBI id null
chromosome length 2920448
location 1371011 ~ 1373189 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU339800
GCCGGACAGATGGAACACCTCCGCGGACAGATAAGCCATGTAGCTGTAGAGGAAGACAAACAGAGGCTCGATGACACGAGTGTGTGAGGTGAACCGTGAAGTGAAGGCCGCCAGGATGCCGTAGATGGCGCCCACCACGATACCACCCAACGACACCACCAGGAAACACACGATACCCAGAAACACATCTGTGACAGTGATCGTACCCACACTGGAGTACTCCTCAAACAGATGATAGAGCACCACAGTGACGGCATCATTGAGTAAAGACTCTCCAAACACCAGGATGTGGAGCAGCTCATTAATGTGGATCTCCTCAAACACAGCCAGCACGGCCACAGGGTCTACGGCTGAGATGATGGACCCAAACAGCAGGCACGACAGGAGGTCCACATGCAAGTGTTGAAGGCCCTCCAGCTGGCACACCCCGTACAGTAGACCACCAACGAAGAAGGCATTCCAAAGGGTCCCCACCACCGCAAACATGAGAATGGTGCCCAGGTTCTCAGTGAAGGGTCGTATGGGCAGGAAATAGCCGGCATCGAGGATGATGGGAGGCAGCAGGTAGAGGAAGAATATCTTGGATTCCAGCGCCGGAGGAGACTCGCCTACCAGCTTCATAAGACCACCGACCAGCAGGCCCACCACGATTAGCAGACAGCTCTCCGGTACGATAGAGGACACACGAGGGATCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU339800 True 696 lncRNA 0.55 2 1371011 1373189

Neighbor

gene id symbol gene type direction distance location
CI01000086_01313364_01320865 NA coding downstream 48997 1313022 ~ 1322014 (-)
CI01000086_01296658_01297947 NA coding downstream 72952 1295830 ~ 1298059 (-)
CI01000086_01257926_01260025 SERPINB1L4, SERPINB14 coding downstream 110986 1257926 ~ 1260025 (-)
CI01000086_01237966_01253245 NA coding downstream 117723 1237911 ~ 1253288 (-)
CI01000086_01193934_01219331 NA coding downstream 151571 1193715 ~ 1219440 (-)
CI01000086_01670242_01672517 NA coding upstream 296599 1669788 ~ 1674496 (-)
CI01000086_01852638_01897719 UBR5 coding upstream 478957 1852146 ~ 1897719 (-)
CI01000086_01915013_01921794 AZIN1A coding upstream 541824 1915013 ~ 1921794 (-)
CI01000086_01948087_01983560 SPIRE1 coding upstream 574818 1948007 ~ 1983560 (-)
CI01000086_01994840_02008387 TPPP coding upstream 621406 1994595 ~ 2008387 (-)
G299321 NA non-coding downstream 16662 1353406 ~ 1354349 (-)
G299331 NA non-coding downstream 24131 1341443 ~ 1346880 (-)
G299283 NA non-coding downstream 133803 1177817 ~ 1237208 (-)
G299299 NA non-coding downstream 139875 1228921 ~ 1231136 (-)
CI01000086_01069219_01094068 AGO3, EIF2C3, I2C3 non-coding downstream 298347 1061523 ~ 1094251 (-)
G299323 NA non-coding upstream 8002 1381191 ~ 1385500 (-)
G299345 NA non-coding upstream 27746 1400935 ~ 1401281 (-)
G299348 NA non-coding upstream 30498 1403687 ~ 1404260 (-)
G299351 NA non-coding upstream 36349 1409538 ~ 1409853 (-)
G299373 NA non-coding upstream 60616 1433805 ~ 1435707 (-)
G299107 NA other downstream 244213 1126738 ~ 1126798 (-)
G299173 NA other downstream 603132 765617 ~ 767879 (-)
CI01000086_00587995_00596565 BRAFLDRAFT_115002, ETFB, ETFB.L other downstream 774382 587765 ~ 596739 (-)
G298872 NA other downstream 834701 535023 ~ 536310 (-)
G299528 NA other upstream 295017 1668206 ~ 1695177 (-)
CI01000086_02366362_02373059 SLC6A20 other upstream 991142 2364331 ~ 2373059 (-)
G299598 NA other upstream 1492493 2865682 ~ 2868103 (-)

Expression


Co-expression Network