Gene
RNA
| Item | Value |
|---|---|
| gene id | G299560 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000086 |
| NCBI id | null |
| chromosome length | 2920448 |
| location | 1802861 ~ 1803892 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU340093 | False | 739 | lncRNA | 0.31 | 2 | 1802861 | 1803892 |
| TU340094 | True | 739 | lncRNA | 0.31 | 2 | 1802861 | 1803892 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000086_01670242_01672517 | NA | coding | downstream | 128365 | 1669788 ~ 1674496 (-) |
| CI01000086_01313364_01320865 | NA | coding | downstream | 480847 | 1313022 ~ 1322014 (-) |
| CI01000086_01296658_01297947 | NA | coding | downstream | 504802 | 1295830 ~ 1298059 (-) |
| CI01000086_01257926_01260025 | SERPINB1L4, SERPINB14 | coding | downstream | 542836 | 1257926 ~ 1260025 (-) |
| CI01000086_01237966_01253245 | NA | coding | downstream | 549573 | 1237911 ~ 1253288 (-) |
| CI01000086_01852638_01897719 | UBR5 | coding | upstream | 48254 | 1852146 ~ 1897719 (-) |
| CI01000086_01915013_01921794 | AZIN1A | coding | upstream | 111121 | 1915013 ~ 1921794 (-) |
| CI01000086_01948087_01983560 | SPIRE1 | coding | upstream | 144115 | 1948007 ~ 1983560 (-) |
| CI01000086_01994840_02008387 | TPPP | coding | upstream | 190703 | 1994595 ~ 2008387 (-) |
| CI01000086_02018950_02030464 | NA | coding | upstream | 214928 | 2018820 ~ 2030525 (-) |
| G299529 | NA | non-coding | downstream | 107952 | 1668012 ~ 1694909 (-) |
| G299527 | NA | non-coding | downstream | 135265 | 1667350 ~ 1667596 (-) |
| G299522 | NA | non-coding | downstream | 149261 | 1653336 ~ 1653600 (-) |
| G299519 | NA | non-coding | downstream | 152533 | 1650101 ~ 1650328 (-) |
| G299518 | NA | non-coding | downstream | 152802 | 1649751 ~ 1650059 (-) |
| G299478 | NA | non-coding | upstream | 2194 | 1806086 ~ 1841270 (-) |
| G299571 | NA | non-coding | upstream | 89115 | 1893007 ~ 1893710 (-) |
| G299493 | NA | non-coding | upstream | 107786 | 1911678 ~ 1912740 (-) |
| G299489 | NA | non-coding | upstream | 122776 | 1926668 ~ 1975954 (-) |
| G299494 | NA | non-coding | upstream | 185134 | 1989026 ~ 2004100 (-) |
| G299528 | NA | other | downstream | 107684 | 1668206 ~ 1695177 (-) |
| G299107 | NA | other | downstream | 676063 | 1126738 ~ 1126798 (-) |
| G299173 | NA | other | downstream | 1034982 | 765617 ~ 767879 (-) |
| CI01000086_00587995_00596565 | BRAFLDRAFT_115002, ETFB, ETFB.L | other | downstream | 1206232 | 587765 ~ 596739 (-) |
| CI01000086_02366362_02373059 | SLC6A20 | other | upstream | 560439 | 2364331 ~ 2373059 (-) |
| G299598 | NA | other | upstream | 1061790 | 2865682 ~ 2868103 (-) |
