G298743


Basic Information

Item Value
gene id G298743
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000086
NCBI id null
chromosome length 2920448
location 2610566 ~ 2610887 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU339154
CTTAAATCTGCACACATCTCATCTAGTCTCGACTAGCGAGTGTCGTCTTTCCCTGCAGATGATGAAGTCTTATAATGGAGGAACACTAGATTCATGTTGCCGCACACTTGTGGAGGACAGGAGGGGCCACCGGTGACAGATCGGCCTCTAATGACCCCGCTGAGGACGCCGGCAGGGCCACGAGTCGCCGTTTGTGCTGAACCACCCGGGCGGAGAAAGGGACCATATGCTGCGGCCCGCCGGTCCAAATGTCTCTTCAGCAGCTGTTTGAGGCCACTGAGCCACCAAAAATACACTGATCCTGGCAGGGCTGAGATTCTCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU339154 True 322 lncRNA 0.56 1 2610566 2610887

Neighbor

gene id symbol gene type direction distance location
CI01000086_02387094_02397102 NOD1 coding upstream 213421 2387094 ~ 2397145 (+)
CI01000086_02381193_02384764 NA coding upstream 225438 2381193 ~ 2385128 (+)
CI01000086_02335074_02346679 SACM1L.L, SACM1LB, SACM1L, SACM1LA coding upstream 263646 2335074 ~ 2346920 (+)
CI01000086_02310487_02314131 RBM24B, RBM24 coding upstream 296419 2309348 ~ 2314147 (+)
CI01000086_02266795_02305843 KIF13A coding upstream 304577 2266795 ~ 2305989 (+)
CI01000086_02741241_02763692 XRCC1 coding downstream 129769 2740656 ~ 2764358 (+)
CI01000086_02773589_02785090 DRD2L coding downstream 162702 2773589 ~ 2785122 (+)
CI01000086_02790491_02793665 NA coding downstream 179604 2790491 ~ 2794239 (+)
CI01000086_02807666_02845401 PHLDB3, ETHE1 coding downstream 195481 2806368 ~ 2845762 (+)
CI01000086_02848037_02858638 NA coding downstream 236145 2847032 ~ 2858832 (+)
G298706 NA non-coding upstream 60598 2546716 ~ 2549968 (+)
G298694 NA non-coding upstream 153035 2457323 ~ 2457531 (+)
G298676 NA non-coding upstream 192750 2415382 ~ 2417816 (+)
G298596 NA non-coding upstream 278807 2330579 ~ 2331759 (+)
G298577 NA non-coding upstream 284841 2322896 ~ 2325725 (+)
G298744 NA non-coding downstream 2106 2612993 ~ 2693507 (+)
G298792 NA non-coding downstream 91750 2702637 ~ 2702912 (+)
G298777 NA non-coding downstream 92763 2703650 ~ 2723553 (+)
G298850 NA non-coding downstream 291161 2902048 ~ 2902710 (+)
G298529 NA other upstream 729113 1876890 ~ 1881453 (+)
G298381 NA other upstream 1433650 1172156 ~ 1176916 (+)
CI01000086_01150842_01165271 DHDDS other upstream 1444644 1150842 ~ 1165922 (+)
G298366 NA other upstream 1462699 1136660 ~ 1147867 (+)
G298208 NA other upstream 1630456 947191 ~ 980110 (+)

Expression


Co-expression Network