G299598


Basic Information

Item Value
gene id G299598
gene name NA
gene type unknown
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000086
NCBI id null
chromosome length 2920448
location 2865682 ~ 2868103 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU340140
CACGATTATAAAAAACAGAACGATATCATTCACTGGTGTTGATGCTAATATAGTGATCATTATAGCCATCGTTCTTGGTTTGAACAGACTTTTACTAGCAGCAAAACACCCACCATATTTGCTGAATATCTCCTTCAGCTTCTCGTCATCCATATCCTCTCCAAAGTTCTTGATGTAAACGTTGGTGAATTCTTTGGCACGGGCGCCCATCTCAGCCTCACGCTCCTTGCGAGACTTGAAGCGACCGACGAACCTTTAAGATGCAACGAGTTACCATAATTATTCTGAATAAATAAAGTGAATTATTTAATGCCATATCAGAGGCTATTTTCATGGCAAACTCAAGTTTAATACACTTTAAATAACCATAACACTAATACTTCAATGAACAGTTATAAAACCTTTTTATATGATAAATACTAATATCTTCTAAAGAGCAACTTATAAAAATGATTTATAATTATTAGTATGAATTTAAGGAAGTACATCATGCTTGAAACAAATTTACCATGCTTTACACACAATTTAATACAATGCAGTTAATTCAAATGCACACTTACACTTTGCGGTCATTGAGCAACATGCCATTCATTTTCTCAATGGCTCTTTCTGCGGCCTCGTGGGTCTCAAAGTGCACAAACCCGTATCCTTTAGAGCCGTTCTCATCGCAAACCACCTTCAGAAAGAGAACACCAGCACTGAGCACAAGCACCAAACGACAGACACCGGAAACATGCGCATCACTGCAAACACGCGTTTTATTACCTTGCAGGACAGGATGTTTCCGAAGGCAGAGAATGTGTCATAAAGGGCCTTGTTGTCGATCGACTTGTCCAGGTTCTTGATGAAGATGTTGCCAACGCCACTCTTACGCAGTGAGGGGTCTCGCTGGGACCACATGATGCGGACGGGTCGCCCCTTGATCACATCAAAGTTCATTGTGTCCAAGGCACGCTCAGTCAGCGGGTTGCTGGAAGTTCACGTAGGCGTAACCGAGAGAGCGGCGGGTCATCATGTCCCTGCACACCCGAATGGACAAAATGGGCCCAGCCGGGCTGAACTTCTCGTACAGCATGGCCTCGGTGACATCCTGGTGTAGATCACCCACATACAGGGAGGCCATTGGGTAACTGGGAGCGCTGGGGTTCATCTTCCTTCCGTACGACAAAAGAGCGACCTACCGAAGCACGAACACCTGGAAACACTGACGAGTTTAGTAATGGCGACGGACGAGATCGGTTTACCTCTCGAAATCGCTTTAACACGACAAATACCTTTAAAGAACAGACTTGAAGACTAATTAAAATGCGTTTGGTACCGAATTGGCGTCGACGTGTTCGCGGTATCGATGATAACAAGATGATTAAAATCTCCTCAGGCCTACTGCGGTGCTGCCTTAATAATAAACTTCTCAAAATCTGTCCGCGGATCCTGCTTCACCGAGGTACTCGGCAATAAAAGTAGATTTTTTGTTTGTAATTTTTTCTTGTTTTGTGATTTTTTTTTGTATTTTTGATTTTTTATATAAGATGTGTGTGCCGAGGCTCTGTGGCACACGCGCTCTCTCTCGCACCGCACAAGGTAGGGGGAGAGAAGCGGAAGTACGGCTCA
>TU340143
CACGATTATAAAAAACAGAACGATATCATTCACTGGTGTTGATGCTAATATAGTGATCATTATAGCCATCGTTCTTGGTTTGAACAGACTTTTACTAGCAGCAAAACACCCACCATATTTGCTGAATATCTCCTTCAGCTTCTCGTCATCCATATCCTCTCCAAAGTTCTTGATGTAAACGTTGGTGAATTCTTTGGCACGGGCGCCCATCTCAGCCTCACGCTCCTTGCGAGACTTGAAGCGACCGACGAACCTTTAAGATGCAACGAGTTACCATAATTATTCTGAATAAATAAAGTGAATTATTTAATGCCATATCAGAGGCTATTTTCATGGCAAACTCAAGTTTAATACACTTTAAATAACCATAACACTAATACTTCAATGAACAGTTATAAAACCTTTTTATATGATAAATACTAATATCTTCTAAAGAGCAACTTATAAAAATGATTTATAATTATTAGTATGAATTTAAGGAAGTACATCATGCTTGAAACAAATTTACCATGCTTTACACACAATTTAATACAATGCAGTTAATTCAAATGCACACTTACACTTTGCGGTCATTGAGCAACATGCCATTCATTTTCTCAATGGCTCTTTCTGCGGCCTCGTGGGTCTCAAAGTGCACAAACCCGTATCCTTTAGAGCCGTTCTCATCGCAAACCACCTTCAGAAAGAGAACACCAGCACTGAGCACAAGCACCAAACGACAGACACCGGAAACATGCGCATCACTGCAAACACGCGTTTTATTACCTTGCAGGACAGGATGTTTCCGAAGGCAGAGAATGTGTCATAAAGGGCCTTGTTGTCGATCGACTTGTCCAGGTTCTTGATGAAGATGTTGCCAACGCCACTCTTACGCAGTGAGGGGTCTCGCTGGGACCACATGATGCGGACGGGTCGCCCCTTGATCACATCAAAGTTCATTGTGTCCAAGGCACGCTCAGCTGAAATGGGCGTAACCGAGAGAGCGGCGGGTCATCATGTCCCTGCACACCCGAATGGACAAAATGGGCCCAGCCGGGCTGAACTTCTCGTACAGCATGGCCTCGGTGACATCCTGGTGTAGATCACCCACATACAGGGAGGCCATTGGGTAACTGGGAGCGCTGGGGTTCATCTTCCTTCCGTACGACAAAAGAGCGACCTACCGAAGCACGAACACCTGGAAACACTGACGAGTTTAGTAATGGCGACGGACGAGATCGGTTTACCTCTCGAAATCGCTTTAACACGACAAATACCTTTAAAGAACAGACTTGAAGACTAATTAAAATGCGTTTGGTACCGAATTGGCGTCGACGTGTTCGCGGTATCGATGATAACAAGATGATTAAAATCTCCTCAGGCCTACTGCGGTGCTGCCTTAATAATAAACTTCTCAAAATCTGTCCGCGGATCCTGCTTCACCGAGGTACTCGGCAATAAAAGTAGATTTTTTGTTTGTAATTTTTTCTTGTTTTGTGATTTTTTTTTGTATTTTTGATTTTTTATATAAGATGTGTGTGCCGAGGCTCTGTGGCACACGCGCTCTCTCTCGCACCGCACAAGGTAGGGGGAGAGAAGCGGAAGTACGGCTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU340140 False 1611 TUCP 0.44 2 2865682 2868103
TU340143 True 1593 TUCP 0.44 2 2865682 2868103

Neighbor

gene id symbol gene type direction distance location
CI01000086_02610598_02642920 CDK14 coding downstream 222762 2610567 ~ 2642920 (-)
CI01000086_02543856_02545475 FZD1, FZD1.L coding downstream 319874 2542368 ~ 2545808 (-)
CI01000086_02403053_02403317 ZNRF2 coding downstream 462365 2402872 ~ 2403317 (-)
CI01000086_02400288_02400580 NA coding downstream 465074 2399858 ~ 2400608 (-)
CI01000086_02366362_02373059 SLC6A20 coding downstream 492623 2364331 ~ 2373059 (-)
CI01000086_02886112_02888612 KDF1A coding upstream 17344 2885447 ~ 2890213 (-)
CI01000086_02893723_02895660 NA coding upstream 25318 2893421 ~ 2895833 (-)
CI01000086_02897831_02901375 TMEM222, TMEM222A, TMEM222B coding upstream 29701 2897804 ~ 2901375 (-)
CI01000086_02906694_02918246 WDTC1 coding upstream 38110 2906213 ~ 2918246 (-)
G299825 NA non-coding downstream 139848 2725595 ~ 2725834 (-)
G299803 NA non-coding downstream 170703 2651013 ~ 2694979 (-)
G299805 NA non-coding downstream 211272 2653669 ~ 2654410 (-)
G299609 NA non-coding downstream 259286 2547583 ~ 2606396 (-)
G299770 NA non-coding downstream 354412 2506190 ~ 2511270 (-)
G299861 NA non-coding upstream 8644 2876747 ~ 2877044 (-)
CI01000086_01852638_01897719 UBR5 other downstream 962263 1852146 ~ 1897719 (-)
G299528 NA other downstream 1170505 1668206 ~ 1695177 (-)
CI01000086_01257926_01260025 SERPINB1L4, SERPINB14 other downstream 1604445 1257926 ~ 1260025 (-)
G299107 NA other downstream 1738884 1126738 ~ 1126798 (-)

Expression


Co-expression Network