XLOC_010855


Basic Information

Item Value
gene id XLOC_010855
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 33735328 ~ 33736759 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00022197
CAAACTTACAAAGCTtgaattagtttttaattaagaATGCAAATTAGGCAACTTTTTCTCTCTTGCATTAAAGCttaaagtgaatatatatatacttgtacatttaaaactatttagatGGTGAAACAAGTAAAATTGGCATCAACAAAATATGAATACTTATCGTCTCACTTGACCACATGCATACTGCCGTTTGACATACTGACACAAGTATGGTTTAATTGCATTCACTCATAACACAGACATGTTTATAAAGATTTAAGAAAGTCTGACTAGACAAATTAATgatcaaacaattaaaaaaaaaacaggaagtggACTAATATGTAGTTAGTATATATACAGTGTAATGCGTGCTGTATCTTTGTAGAAGTTTCTGTGCTTCTATAGATAATTCAAGCTATAGTAGTGCAAATGCAAGTCTATTTGTCTTCCACCTGTATACAAAATTCAAACTTCATCTTCCCACGCATCTCTGGACTGCAGAATTATTTCAGCAGTTCTTTTATCTGACATTGCTATGCATTTTGGAAGACTCTCCACTCAATTGAATGCATGTGCAATGCAAGTTCTGCTAAGGAAATCTAAAGTTTTAGAAAACAAAAGTGCTCACTAACTACAGCATTCAACAGTCACGCATTTATGTGACTTATATGGTGTGTAAATGCTTCAGCTTTGGGCGTATGACTTTTATTTTACCCAAAACTCACCATCTATCATGCATTCATTGCCGTTCTAACCACTTTGCTTGGCACAGAGTGTTTGGAACAATTCTAATACCAGCTTAATAACAGTTCTGACTGGCCGGCAAAAATAAAGAAGGCGATAACTAGTAGGCAGATCAGATATTTTTATCTGTGCATCGAGGCCTGTACATTAATGGAGTGTTGATACTGGATTGTGCGGTGGATTTGAACTCAGCGTTGCATAGGAAGCATCAAGTCTTGTTTGTCCAGTTGTAAACCAGCAAGTGTATGTTGAGGGTTGTGATGATTGTGCGAGGGGTAGATTGCTGGTTTGCTGTTATGTTAAATAGCAGTATCAGCATGGGCGTTACTTGAAATGGGTAGTTCTTGGGTGAGGGCACAGCAGTgtataatagtgtgtgtgtgtgcatgtgtaaaggAAGGTAAGGCATGTGCATGAGGGTTGTATTCTATAGGGTGCTGTTGCAGTTGCGACAGAGGATCTCATCTTGCTCGGGGAAGAAGCCTGCTCCCACCAGAGAGACAGAGCATCGAGAGCAGGTGAAGCACGGCTGGTGCCATTGCCGGTCCTCAAACGAGATGTACTTTCCCCCGCCAAAACCT

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00022197 True 1310 lncRNA 0.39 2 33735328 33736759

Neighbor

gene id symbol gene type direction distance location
XLOC_010854 utp11 coding downstream 84750 33645721 ~ 33650578 (-)
XLOC_010853 NA coding downstream 142748 33560863 ~ 33592580 (-)
XLOC_010852 BX537338.1 coding downstream 193370 33515766 ~ 33541958 (-)
XLOC_010851 pnrc2 coding downstream 629651 33101851 ~ 33105677 (-)
XLOC_010850 dop1a coding downstream 637930 33062570 ~ 33097398 (-)
XLOC_010856 BX530064.1 coding upstream 13308 33750067 ~ 33758285 (-)
XLOC_010857 rspo1 coding upstream 36143 33772902 ~ 33817828 (-)
XLOC_010858 dnali1 coding upstream 188984 33925743 ~ 33930759 (-)
XLOC_010859 NA coding upstream 302762 34039521 ~ 34044379 (-)
XLOC_010860 rcc1 coding upstream 448854 34185613 ~ 34195002 (-)
XLOC_010626 CR392024.2 misc downstream 12840153 20895112 ~ 20895175 (-)
XLOC_010847 NA non-coding downstream 915563 32742342 ~ 32819765 (-)
XLOC_010843 NA non-coding downstream 1107888 32587438 ~ 32627440 (-)
XLOC_010842 CR848729.1 non-coding downstream 1161092 32574110 ~ 32574236 (-)
XLOC_010862 AL954327.1 non-coding upstream 563520 34300279 ~ 34306670 (-)
XLOC_010864 AL954327.2 non-coding upstream 615186 34351945 ~ 34352061 (-)
XLOC_010866 CR626886.1 non-coding upstream 820257 34557016 ~ 34565638 (-)

Expression


Co-expression Network