XLOC_010858 (dnali1)


Basic Information

Item Value
gene id XLOC_010858
gene name dnali1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 33925743 ~ 33930759 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00021248
TATAGTAACAATACACAATAAAACGAAACGTCTCGGCGCTGGCGAGTGGGCTGAAGTCTTATAACAAAACGTAAACTCGAAACTTTTGTGTCGTTTCTTGacaaattaactttaaaaacATGATTCCTTCGTCTGACTCCTTGTTGAGGTATGAATCTCCGGTGTTAGTGAGCAAGAATACAGAGAGAAAGTCTCCAAGGAGTCGCCCTTTGAAAGTGAGCTCACAACAGATGGTAGAAAGCGGTCCTGTTCCACCGCCACCCAAACCCAAGAGTCCCTCTGCAGAGGCCAACAGACAGCAAACCGAAGAGATCCTGAATGCCATCCTCCCACCTAAGGAATGGATGGAGGACAACCAGTTATGGGTGCAGCCGGTGTCCAGCGTTCCATGCACACGAGTGGATGTTATTCACCTGCAAGAACAACTAGACAAAAAACTGCAAGAGAGGCAGGCCAGAGAGACGGGCATCTGTCCCGTGCGCAGAGAGCTCTACAATCAGTGTTTCGATGAGCTCATCAGACAGGTGACAATCAACTGTGCTGAACGGGGCCTTCTGCTGCTGCAAGTGAGAGATGAGATTCGCATGACCATCGCTGCTTATCAGACGCTGTATGAAAGCAGTGTGGCTTTTGGCATGAGGAAAGCACTGCAGGGAGAGCAGGGGAAGTCGGACTTCGAGAACAAGATTTCAGAGTTGGAGAGCGAGAAGCGAGACCTGGAGAGGCTGGTGAACGAGCAAAAAGCTAAATGTGATGCAATCGAGAGACGGGAAGCAGAGCGGAGGGACATTGAGGAAAAAAAGCATGCGGAAGAAGTTCAGTTCCTCAAACGAACCAATCAACAactcaaggcACAACTGGAGAGCATAATCACCCTGAAGAATAAATCCTAAATATTATTAGAACAATAATACTCCAACTCAAACAAATTCAACAAATAAAAGATTTATACGCTCTGAGAA
>TCONS_00021249
ATGTTCGGTTTAGTTTATGGGTATGAATCTCCGGTGTTAGTGAGCAAGAATACAGAGAGAAAGTCTCCAAGGAGTCGCCCTTTGAAAGTGAGCTCACAACAGATGGTAGAAAGCGGTCCTGTTCCACCGCCACCCAAACCCAAGAGTCCCTCTGCAGAGGCCAACAGACAGCAAACCGAAGAGATCCTGAATGCCATCCTCCCACCTAAGGAATGGATGGAGGACAACCAGTTATGGGTGCAGCCGGTGTCCAGCGTTCCATGCACACGAGTGGATGTTATTCACCTGCAAGAACAACTAGACAAAAAACTGCAAGAGAGGCAGGCCAGAGAGACGGGCATCTGTCCCGTGCGCAGAGAGCTCTACAATCAGTGTTTCGATGAGCTCATCAGACAGGTGACAATCAACTGTGCTGAACGGGGCCTTCTGCTGCTGCAAGTGAGAGATGAGATTCGCATGACCATCGCTGCTTATCAGACGCTGTATGAAAGCAGTGTGGCTTTTGGCATGAGGAAAGCACTGCAGGGAGAGCAGGGGAAGTCGGACTTCGAGAACAAGATTTCAGAGTTGGAGAGCGAGAAGCGAGACCTGGAGAGGCTGGTGAACGAGCAAAAAGCTAAATGTGATGCAATCGAGAGACGGGAAGCAGAGCGGAGGGACATTGAGGAAAAAAAGCATGCGGAAGAAGTTCAGTTCCTCAAACGAACCAATCAACAactcaaggcACAACTGGAGAGCATAATCACCCTGAAGAATAAATCCTAA
>TCONS_00021250
AATAAAACGAAACGTCTCGGCGCTGGCGAGTGGGCTGAAGTCTTATAACAAAACGTAAACTCGAAACTTTTGTGTCGTTTCTTGacaaattaactttaaaaacATGATTCCTTCGTCTGACTCCTTGTTGAGGTATGAATCTCCGGTGTTAGTGAGCAAGAATACAGAGAGAAAGTCTCCAAGGAGTCGCCCTTTGAAAGTGAGCTCACAACAGATGGTAGAAAGCGGTCCTGTTCCACCGCCACCCAAACCCAAGAGTCCCTCTGCAGAGGCCAACAGACAGCAAACCGAAGAGATCCTGAATGCCATCCTCCCACCTAAGGAATGGATGGAGGACAACCAGTTATGGGTGCAGCCGGTGTCCAGCGTTCCATGCACACGAGTGGATGTTATTCACCTGCAAGAACAACTAGACAAAAAACTGCAAGAGAGGCAGGCCAGAGAGACGGGCATCTGTCCCGTGCGCAGAGAGCTCTACAATCAGTGTTTCGATGAGCTCATCAGACAGGTGACAATCAACTGTGCTGAACGGGGCCTTCTGCTGCTGCAAGTGAGAGATGAGATTCGCATGACCATCGCTGCTTATCAGACGCTGTATGAAAGCAGTGTGGCTTTTGGCATGAGGAAAGCACTGCAGGGAGAGCAGGGGAAGTCGGACTTCGAGAACAAGGTAATGTGCgatattttgaaatattcatTAGTGTTTGGTAACTGCACTATAAAAACGCAATAGGGCTTCTAAGGGTTCACTTTATGGTTTcaaataatgtttgtaaaaaacaattgtcaaaatatgagtgaaataatGAGAGAATGTggtgtttctctggatttactagtttgggtttgagtaaaattatgatatttgttttattctataaaaggTCTGACaacatttcttccaaaaaaagacttttatttgtttttctttttcaaagaaaattacagagaaaaaaatgtaatactcCTGAAGCAGCATGTTGCTTGTAaacataaaacctttttttttgttaaaaaaactaaaaatctaaTTGACAATAAAAAGTTTTCTATTTAATTTGGAAGAAATATCATCAATAGCAACCAgatttaatcaaaaattacatTCACTTACAAACAGATACGACCAAAAATCAGAAGTTTTCAAGTTTTTCTTCTTAACTATTAATTTGAAAAATGATAATTGAccatattaattcatttattttattttcggcttagttcctttattaatctggggtcacaacagtggaatgaaccgcctaattGACcatataatattttgaatttttataatttttcattaattcatgagaaagacttggttcgatcAAGTCGGTCGAAACGTTGTGTGAGTGCTATTAAAgacttttgagagctaaagtggcagtgtgccgattttcttttgGTCTTTTGCTacaaagacttggttcgaaccaatcagcgtgctctattgtgaacgagatgcaacttcattattattgcatATATTGCTTCGGAGACTGTATTTACCAGTTGTAGTGTTCAGAGAAACACCATATtgtgttgccaaccataattaaaacaaGAAGTAGAATAATTGTTCGCAGACACAGGTCAtaagtgttgcatttataaatgtgccgcaacaaaggttttgtttccatttccccacGATGAGTGCACAGCTCACGTATGGACCTTACAATGGTCTGCTCACATACAACAAAAATaagtttgtaaggaacattttttatcCAAGAGCTTGTCGCATCTGGAATTGGTGAAATCTGGATTTCCACTagtcttcttaaaaaaaaaaaaaa

Function

symbol description
dnali1 Predicted to enable dynein heavy chain binding activity. Predicted to be active in axoneme and filopodium. Orthologous to human DNALI1 (dynein axonemal light intermediate chain 1).

GO:

id name namespace
GO:0030175 filopodium cellular_component
GO:0005930 axoneme cellular_component
GO:0005737 cytoplasm cellular_component
GO:0045504 dynein heavy chain binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-080204-7 Predicted to enable dynein heavy chain binding activity. Predicted to be active in axoneme and filopodium. Orthologous to human DNALI1 (dynein axonemal light intermediate chain 1).

Ensembl:

ensembl_id ENSDARG00000069815

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00021248 False 962 mRNA 0.47 6 33925743 33930076
TCONS_00021249 False 765 mRNA 0.50 7 33925812 33930759
TCONS_00021250 True 1805 mRNA 0.38 4 33926871 33930060

Neighbor

gene id symbol gene type direction distance location
XLOC_010857 rspo1 coding downstream 107915 33772902 ~ 33817828 (-)
XLOC_010856 BX530064.1 coding downstream 167458 33750067 ~ 33758285 (-)
XLOC_010855 NA coding downstream 188984 33735328 ~ 33736759 (-)
XLOC_010854 utp11 coding downstream 275165 33645721 ~ 33650578 (-)
XLOC_010853 NA coding downstream 333163 33560863 ~ 33592580 (-)
XLOC_010859 NA coding upstream 108762 34039521 ~ 34044379 (-)
XLOC_010860 rcc1 coding upstream 254854 34185613 ~ 34195002 (-)
XLOC_010861 phactr4b coding upstream 268538 34199297 ~ 34285106 (-)
XLOC_010862 AL954327.1 coding upstream 369520 34300279 ~ 34306670 (-)
XLOC_010863 hivep3b coding upstream 390635 34321394 ~ 34425561 (-)
XLOC_010626 CR392024.2 misc downstream 13030568 20895112 ~ 20895175 (-)
XLOC_010852 BX537338.1 non-coding downstream 383785 33515766 ~ 33541958 (-)
XLOC_010847 NA non-coding downstream 1105978 32742342 ~ 32819765 (-)
XLOC_010864 AL954327.2 non-coding upstream 421186 34351945 ~ 34352061 (-)
XLOC_010866 CR626886.1 non-coding upstream 626257 34557016 ~ 34565638 (-)
XLOC_010867 NA non-coding upstream 730301 34661060 ~ 34886237 (-)

Expression


Co-expression Network