XLOC_010863 (hivep3b)


Basic Information

Item Value
gene id XLOC_010863
gene name hivep3b
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 34321394 ~ 34425561 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00021257
GGAGGAGGAAAGGGAAGAGGCAGAACACCGGTATGCTCCAAGGGTAGCTAGTCCAGTGAGAATCGTGGATCCTTCATATCCTAGTTTGCATACAACAACATCTGTCAGTTGGTGCTACCTAAATTATACAAAGCCCAACCCATCTACACATAGAGATTCAACATCAGTCTATTCCTCATGGAGTGTTAGCATGCATAACCCCAATATACCTGGTTTGTCCACCAAAATATTACTATCTCTGTTGCgctcaaaacaaaaacatagtgCTGAAACATACACAATGGCTACAGCTCCACCACCAACCATTGACAAGCTGGTTTCTACAGACAGCAAGGAGACCAGTGCATCAGAGGTACATGCCTCACCACCCAGCACCCCCGTCAAAGTAAAAGAGGAACCAACAAGTGAAAGTAGGGACAAAGATAAGGAGAGTGCTGATGACATGCCAGCTACCTCGACTCAAAATGAGGCAGTACGTGTTTGCATTTTTGAGGGCGGGTATAAGTCAAACGAGGATTATGTGTATGTTCGTGGAAGGGGAAGAGGCAAGTACGTGTGTGGTGAATGTGGGATTCGCTGTAAGAAGCCCAGCATGTTAAAAAAGCACATTCGCACTCATACAGATCTGCGTCCGTATGTCTGCAAGTACTGCAACTTCGCCTTTAAAACCAAAGGGAACCTTACCAAACACATGAAGTCTAAGGCTCATGGTAAGAAATGCCTGGAGATGGGAGCATCCGAGTCCTCTGAGCTGGACCCTGAGGAAGCAGGAGGCAGTGATGAGCGAGTGTGTGAGTCAGAAGACCAGGAGGGCCACCAGTTCTCTGATGTTGACGATTCTGAAGtagaagatgatgaagatgaggaagAGGACTTCTCCTCCCATGATGAGCCATCTTCAGCCTGCTCTACTGACACCCGTCAGTCTACAGGTGACCTTTCTGAAAGTGGCCACGGCTCACAGACTGAGCCCTCTGACCCTACAGCAAGGGAGGAATACTCTTCACCTCATAGGCCTTGGCCTGGCATACGAGCCATGTCTCCAGGAGGCAAGAGGGCGTCTTTCTCTCGGAAGGGCTGGGAGGTTTCCCCGAGGAACTTCTCCCCAAGCAGCGAGGGCTCTCCTCTCAGAAGCCTGTCTCCAAGGGTTGAATTGTCCTCACCCAGTCGTCATCTCTCTCCATCTCCAGAGAGAGGCCCGTCACCCATCAGAGCTTTGTCTCCTCTCAGACCTCTCTCTCCTCTGAGACCCGTGTCACCCGCTAGATACAGGAGTGCCAGAGCTCTATCCTCCCCTACGCCTTTAAAGCCTCAGCATCGCCCGCACAGCTCTCCCGCAGGCCTCCACTGGGAGCCCAGCAAACCAGCTACTAACACTCAAAAGGACAAACCTGGTACTCAAGCAGCTCCAGATCCCTGCCTGCTTTCCCCATCCCAGCGCTTTCCTCCCTGCGAGCCTTTCCCTCCAGCTCCAGTGACTCCATGGACAGTGGACCGCATGTTTAGCCACCTTCCTTTGCACTCCCAAGATCAAGCCCGCATGCCCTATCACATGATTCCCATTGGGGGCATCCAAATGGTGCAGCTCCGACCCCCATCACGGCCCAAACTGGAACGACAGTCGTCGTCCACCCCTTCACCCACCTCTCCCAAAGAAGACTCCCCTTTTTCTCTCGCCAGAAGGGATTATCCATGGATCTCATCTTCGGAAAGCAGTCCGCAAAGAACTAAAATCCAAGATGAGGGAGCCAGTCAGTCTGACCGGTTTAGTCCCAGTACAAGCTCGGCCGTACCTAAACTCCTCTCTTTAAAGCAAGGTATAGGGGAGCAACGGACTGCCAAGGTCAGAAAGCAATATAGCGACTCGAGCTCCACCACAAAGACTCGCACTTTTGGTCCCGAAGCATCAAGGAAAACTGCAGCAGACAGCGATGAAGGAGCCCAGAGGATCTCGCAGGGGGAAGAAGCGAGTTCCTCAGGTGAAAGCAGACTGCTACGTGGGACAGAAAAGCCTGTAGCGGCGCCACTCAGGGGACGTGGCTCTTCTGCAGAAGGATCTGACGCTGATCCAGATAGCACTTAAAAACCTCTGTGCACAATGGTGAAATGCTTTCTACTGCTAATActactattgttttgtttttgtaatgcgcttattttttatatacacaattttcAATACTCTTGGTAACTTGGTAAATGTTTGTTCTGCAATATTCAAGATTGTAATatgatgcacttttttttttcttggaaaaatATTTCTGTAAATCGATTACGTCTGTCCCTCCTATAATCTTTATTGACATTGCAATCTTAATATATCTATTTgaatatgtatatgtaaaaacaAACCGAAAACCTTGTACTTGTAAAACATTAAGTATGGATATGTTTCTAAATGACCAAGATGAAAACTTCAATTGAGTAATTCCAATATTTCGTCTCTTGTCCAGTATTGCGCAAATTCTAGTGATGTGTGCCTTTTCTGTCCAGATTTACTGCTTGAAGTGTCAAAGATAAAAAGGCTGTGAATTCTTTTCAtgaatatagatttttatttgagcTGGTGTTTGAAGAAGCGGTAAGGTTTTCTTTGTACGTTAGGGTAAACGAGACAGGCATTGTGCTGTTTAATAGACAAGAGACGAAGGTTTAGGTGATGAGCCTTGCAGGGAAATTGCACTGAagtcatattttttataatacataAGATGAAAATGATTAGATAAGTGTCTCTGTACAGATAGAAAGTCTATGGTCCATATTTATTGCCAtgtgaaaatatgaaaatgttttgtttactttGGTTTTTCAAAGGGATTTCTATTgtcgtttttattattattctttacaCTTTCTGTTTATAGTTGCGTTTCTTTTTTTAGTTGTGACCTTAAGACTTGAAATGAAGAAACTGGACAGGCTTACAGTGAACTCCAAAATTTGTCACAGACATTTTGCATTTCTGAACCAATAAAGGTACACCAGGAATTAC
>TCONS_00021258
TATGAtttcagtttttactgcaaatgtcactaCCATAACACTTGAATTGCGCATGAGTATTTTCTGGTTTGTAAAAATTGTAGTGCAAAATTTTCACATCGATGTGCTTTTTTTAATCAATCTTTTGCATCATTTTTGCAGGTTGAAGACTCCAATTCCCGTTGTAATTGGATGGAAAAGAGTGACTTGTTACATTCATCAAATTCCACCCTTTGATACTCTACAAAATTAAGAATGACCAACGGGCTTGAAGCGACATAAGCCAAAGGCCAGTGAAGTTCTAACATGTGACAAGCTGAAGACTGGAGACTAATAGATCTTCAAGAATTATTTACATGTCAGCAGAGAAAGTGCCTCAAAAgcaatttgaaacattttttgtcAAGCTCCATTGCCAGGCATCAGACCAAAAGACACACAATGATGAAGTTCACCAAGGCTGTTTGTGAACAGGAGAGGGGACGTTTAGCAAACAACCAGCATTCACATATATGGCGGCTGCACCATGGCACTGTTTAATTGTGCCTTTGTCTTTTAAGCACACTGTCCGGTATCTTACATTAATTATGGCATAATATAGTTAGCCCCCTAAAGCAAGAATAAAGACTTTTTTTCCTATCGGAAAGGTATTGATGCGATGATGTTTATCAGATTGGTGGTCAAAGAACCATTCCCATTGTGTCCTTAAGGCCTTCACCCCACATCCTATGGAGGCAGAGGAAAAGCAGTCTGCCGATGGGGAGCAGTCTGGTCAACAACCGCAGCCATCATCAAAGTCTTTGTTAGCAGCACAGCTGCCTCAGTTACAGCAACAAGCTACCTCGCAATCTGTCCATGGATCACATGGCCGCCTTCAACACAGGCAGCCGAAACGCTGTGAAATGCTCCAAAGGCAGAAGCAGCGACATCAGTCACAGGCGAGTGGGTCATCTTGGCAGCTCTCAGAAATACCTGGTCCTTCAAGAGGCAGCTGTTCTGCCCTGGGAGATCCATCTCCCCAATCTCACAATGTCCATCAAACTCAATCTATGCCCAATGTCGAAGTACAGGAAGGCACCCCATGTAGACAAGAGCGCAAACCCCAAAAACCAGGGAAATATGTGTGCACATACTGCGGCCGACCTTGTGCAAAACCTAGCGTCCTGCAAAAACATATCCGATCCCACACAGGAGAGAGGCCCTATCCATGTGTCCCATGTGGCTTTTCCTTCAAGACCAAAAGCAACCTGTACAAACATCGCAAATCTCATGCACACCGAATAAAAGCAGGCATGGCTTCAAGTCGTGAGGAAACAAGTTTTATTGGGCCAGAAGGTGCAGTCTTGGGTGAAGAACAAGAAGAGGGTACGGAGGGAGAGAGTACAGGTTCTGAGGATGAGACAGGGCAGCACCAACCATCTACCTCACAAGGCAGACCAACTCTGAAAAAAAGCTGCAAAGTGGAATTGTCATTCATAGAGGAGGGACCCCAAACTGAGGATTCACAGGCAGTCAAGCAAAGGTTAGCAATGAGGCTAAGTGAGAGAAAACGTGCGCCCAGAACATCTTCAGATGATACACGATCCTCATTGGGTCCTGGCAGTAAGGGGAGCACAGAATCCGGATATTTTTCCAGTTCTGGGAGTGCTGAGCTCTCCCAAGTGAGCCCACCAAATGCCAgtgctaaaacatatgctgagaTAATTCTAGGAAAGTATGGACGACTAGGACAACAGCAACGAATTCCACATCAACAACTGcagttatcatcatcatcttcaggtCAACAAGAAAAATCAATCCCTTTCACCGTTCCCAAGACACAAGTCATTGAGCATATAACAAAGTTAATCACTATAAATGAAGCCGTGGTGGATACAAGTGAAATTGATAGTGTCAAACCAAGACGTTCCTCGCTCTCTAGAAGAAGCAGCATTGAGTCTGTTAAGTTCTCTTCACCCAAAGAACATTGTGTTTTTGAACCAAAAGCAGAAGCCCCTGGCTCTTGTGGCTCTGCTGTTCAACTTATTTCTGGTAGTTTTGCTGGCGAATTAACTGGTTCGTATTTGACAGAAGCAGAAAAATTGGCTGGTCAGAGCTCTAGTGCTTTTCTCTACAGGAGTCAATCAGTGCCATCTTCTGGTAAATCTTCAGATACGACATCACACAGCTTTCGTCTCAGTCATTCCTTTGATGATCAGCAGGCCATAGCAGCTGAAATGAGAATTGGGCCCCATCAACGAATGTTGCGACGCCAGCCTGCTATTGAGATGCCGGTTGGAGCGGAGCTCATTATAGAGGATGCAGGCCCTTCATcttcaagtttaaaaaaaactgaaccaGGAATAAAGCGAGAAAGGGAAATTTTCTTATATGAGTGTGAAATGTGTGGAAGTCATTTAAAGAATCAAGACTCTTTTGCTGCACACAGACTAGCATGCATGAGTAAATCTTTACATAGTTTTCAAAGTGAAGAAGGAAGTGCTTTAATTGAAAACCAGCCACAGATCATGAGCTACAAGTTCAAAGCTATGGCCATGGCTGTTCGCAAGCGTAAAAAGAAAGAGGAGAGTCTTGAGGAAGACCCCCCCAGTCCAGGTCCAACCGCTGTGTCATTCTGCTCTAAGCCTCTGTCTATGCCAGGTTGTAGTGATAATCAGGGTGCATCTTGTGGCCTTTCACCAAGTGAGCTAGAAAGAAGGGGTTCCTGTAAAGAAATTTCTGTCATCCAACATACCAGATCATTTGAAAAACAGGAAAGCATCCCTATGACAAACCAGGAAGAAGAGCCAGAACATGAGCCATCACAGGAGCCAAAACCAACCTCTACTTCCCGGTTAATTCGTCAATCCAACATTCAAGTTCCAGAAATTCTTGTTACAGAGGAGCCAGATTCAGAGATGTTATCTCAACCAGTAAGCACCTCTCTAGAATCTGAGAAAGTGGAGGAATTCCAGTGGCCTCAGCGTAGCCAAAGTCTGTCTCAGCTCCCTGCAGAGAAGCTACCGCCAAAGAAAAAGCGTCTCCGTTTGGCTGAGGCAACCCAATCATCAGGAGAATCTAGCTTTGAGTCAGTATCGCTGCCACACAGCCCAAGCCAAGAGAGCAATGTTTCCCATGCCTCCAGCCGATCTGCATCCTTTGAGGAAATGGGAAGGCCAGACTCTGAAATGCAAAGTGCTACTAGGAGCTCCCAAGTTTCTCACATGCTCACCGTCCCATCAAGTGTCTATCAATACCATCAGTCTCAAAGAGAGATGCGGCGCTCAACCTCTGAACAGGCATCTGCAAGTCCGGCTTACCCAGCACATGTAGAAGAAACAAGAAGCAAGTCATTTGACTATGGCTCCCTATCTCTAGAGCGTACTTCTGTTACTTGGAAGGAGAGGAGGAAATGTCTCTTGGTGAAACACGGAACTCTTGGTGAACCTGACCATGAGGAGCCATCTTCTAAACATGGCTTCTTAGCTGTTTGCCAGTCCTACCCAGCTCATCCTCCTTTCACAATCACAGAGAACAGAGAGGGAAACAGGACCTCTAGGTTTAGCTCAGAGAATATAGGCAAGACCTTGCAACTGTTCCACTCCCCTCTTGGCCTCCCACCAGCAGTTTTCCCTATACATCAAGCAAATCCTGATTTTTATTCCTCAAGTCAGCTAACTAGATTCGTCCCAGTCACTACAGGAATCTCAGCAGTCATTTCACCGCAAATGTTTCACCAAGGCTACCTTCACAGTGAGACACCTCCGGTAAATCAAAGACCCACAGAGTATGTAGAACGCCTGCCCCTTCAGCCACTCGCAACTTTATTCCCGCTACAATCAAGTGATGTTGCTCAGGCGGTTTGCTTTCCCATGCCAGGAGGTCTGACTATTCAGGTCCCCTCTGGGCCTCTTTTCAGGGAGTTTAGGTCATCACCATCCTCTTTGCCTAGTCCTGTTCATTCACAACAGCAGCTAGTAGTTCGCCACAGTCCCCATCCTGTGATTGCTCCTTGCCTTCAACAGCTTGTGCCAGTGGTGTCCCTTGTAGTGCCTGTGCGCTTACAGACTCACATTCCTACCTATGCTAGTGCCATGTATACAACCATCTCACAAATTTTAGCCACAACACAACATCCAATCTGTTGTACAGCTATGGTCATCATGGGTAAACTGGAGGAAGACAAGATTCAGAGATCTTACCTTAGGCTGCCCTCGCCAAGCCCTAAGAGCTATATTCCCTTGCCGCTGCCTCTCGAACATGGAGCAGGAACTTCATCTGATGACAGCTATGGACAACTTGGTGCCGGAGGAAGTAAACGAATGCTGTCCCCCGCAGGTAGCCTAGAACTCAGTTTAGAGGCACATCGACACCAAAAGCGGGtaaaagaagaggaggagaaagaAGAGGATGACAAGGAAAATGCTGATAACAAATGTGATGAAAAATCTCAGGAGTTAAGTCAGGGTAAAAATAAGTATAGGCTAACAGTGGAGAATGTCGGCAGGGAAAAAGATCCAAGAGAAGTAATAGAAACGGAAGAGTCAAGCAAGCAGAACTTACATCAACACAAAACTGAAACCTTAAAGGAGGAGGAAAGGGAAGAGGCAGAACACCGGTATGCTCCAAGGGTAGCTAGTCCAGTGAGAATCGTGGATCCTTCATATCCTAGTTTGCATACAACAACATCTGTCAGTTGGTGCTACCTAAATTATACAAAGCCCAACCCATCTACACATAGAGATTCAACATCAGTCTATTCCTCATGGAGTGTTAGCATGCATAACCCCAATATACCTGGTTTGTCCACCAAAATATTACTATCTCTGTTGCgctcaaaacaaaaacatagtgCTGAAACATACACAATGGCTACAGCTCCACCACCAACCATTGACAAGCTGGTTTCTACAGACAGCAAGGAGACCAGTGCATCAGAGGTACATGCCTCACCACCCAGCACCCCCGTCAAAGTAAAAGAGGAACCAACAAGTGAAAGTAGGGACAAAGATAAGGAGAGTGCTGATGACATGCCAGCTACCTCGACTCAAAATGAGGCAGTACGTGTTTGCATTTTTGAGGGCGGGTATAAGTCAAACGAGGATTATGTGTATGTTCGTGGAAGGGGAAGAGGCAAGTACGTGTGTGGTGAATGTGGGATTCGCTGTAAGAAGCCCAGCATGTTAAAAAAGCACATTCGCACTCATACAGATCTGCGTCCGTATGTCTGCAAGTACTGCAACTTCGCCTTTAAAACCAAAGGGAACCTTACCAAACACATGAAGTCTAAGGCTCATGGTAAGAAATGCCTGGAGATGGGAGCATCCGAGTCCTCTGAGCTGGACCCTGAGGAAGCAGGAGGCAGTGATGAGCGAGTGTGTGAGTCAGAAGACCAGGAGGGCCACCAGTTCTCTGATGTTGACGATTCTGAAGtagaagatgatgaagatgaggaagAGGACTTCTCCTCCCATGATGAGCCATCTTCAGCCTGCTCTACTGACACCCGTCAGTCTACAGGTGACCTTTCTGAAAGTGGCCACGGCTCACAGACTGAGCCCTCTGACCCTACAGCAAGGGAGGAATACTCTTCACCTCATAGGCCTTGGCCTGGCATACGAGCCATGTCTCCAGGAGGCAAGAGGGCGTCTTTCTCTCGGAAGGGCTGGGAGGTTTCCCCGAGGAACTTCTCCCCAAGCAGCGAGGGCTCTCCTCTCAGAAGCCTGTCTCCAAGGGTTGAATTGTCCTCACCCAGTCGTCATCTCTCTCCATCTCCAGAGAGAGGCCCGTCACCCATCAGAGCTTTGTCTCCTCTCAGACCTCTCTCTCCTCTGAGACCCGTGTCACCCGCTAGATACAGGAGTGCCAGAGCTCTATCCTCCCCTACGCCTTTAAAGCCTCAGCATCGCCCGCACAGCTCTCCCGCAGGCCTCCACTGGGAGCCCAGCAAACCAGCTACTAACACTCAAAAGGACAAACCTGGTACTCAAGCAGCTCCAGATCCCTGCCTGCTTTCCCCATCCCAGCGCTTTCCTCCCTGCGAGCCTTTCCCTCCAGCTCCAGTGACTCCATGGACAGTGGACCGCATGTTTAGCCACCTTCCTTTGCACTCCCAAGATCAAGCCCGCATGCCCTATCACATGATTCCCATTGGGGGCATCCAAATGGTGCAGCTCCGACCCCCATCACGGCCCAAACTGGAACGACAGTCGTCGTCCACCCCTTCACCCACCTCTCCCAAAGAAGACTCCCCTTTTTCTCTCGCCAGAAGGGATTATCCATGGATCTCATCTTCGGAAAGCAGTCCGCAAAGAACTAAAATCCAAGATGAGGGAGCCAGTCAGTCTGACCGGTTTAGTCCCAGTACAAGCTCGGCCGTACCTAAACTCCTCTCTTTAAAGCAAGGTATAGGGGAGCAACGGACTGCCAAGGTCAGAAAGCAATATAGCGACTCGAGCTCCACCACAAAGACTCGCACTTTTGGTCCCGAAGCATCAAGGAAAACTGCAGCAGACAGCGATGAAGGAGCCCAGAGGATCTCGCAGGGGGAAGAAGCGAGTTCCTCAGGTGAAAGCAGACTGCTACGTGGGACAGAAAAGCCTGTAGCGGCGCCACTCAGGGGACGTGGCTCTTCTGCAGAAGGATCTGACGCTGATCCAGATAGCACTTAA
>TCONS_00021260
GCCCTGTTGGCTCGAGAGCGTCCACATAACGCCGAGAGAGGCGTCAGCAGCGATTCCGTTTGACAGGCAATGGGATGCGGACCACGACACGCTGCTCAACGACTACAACAACGCCAACATCTGTGTCAGGTTGAAGACTCCAATTCCCGTTGTAATTGGATGGAAAAGAGTGACTTGTTACATTCATCAAATTCCACCCTTTGATACTCTACAAAATTAAGAATGACCAACGGGCTTGAAGCGACATAAGCCAAAGTAAGTGATGACTTTTGCTTGCAACCACCTGGGAGaaagggctgggccgataaaagATATTATATCAAATCTCGATAAAATTGATGTCAATaccaatgataagctctggacttttttgcTCTATATTTATCTACAGTAAAAGTCAATCAAACAGTAAAAatatgcaacaatgggaatctaaaagtgtgttgatattagaaatGAACTAAATTTTCTGCCGCCGAAAATTTATTggccgaaaatatgttatgccactTAATGGACCCACTAATTTTtatggcttcagtcattgttggggtagtCTTTAAAATCTAGAAACAtcttatatcgaaatatatac

Function

symbol description
hivep3b Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be active in nucleus.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000037154 ENSDARG00000105308

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00021257 False 2998 mRNA 0.46 6 34321394 34338537
TCONS_00021258 False 6632 mRNA 0.48 7 34322309 34401412
TCONS_00021260 True 595 processed_transcript 0.40 2 34400806 34425561

Neighbor

gene id symbol gene type direction distance location
XLOC_010862 AL954327.1 coding downstream 14724 34300279 ~ 34306670 (-)
XLOC_010861 phactr4b coding downstream 36288 34199297 ~ 34285106 (-)
XLOC_010860 rcc1 coding downstream 126392 34185613 ~ 34195002 (-)
XLOC_010859 NA coding downstream 277015 34039521 ~ 34044379 (-)
XLOC_010858 dnali1 coding downstream 390635 33925743 ~ 33930759 (-)
XLOC_010865 serinc2l coding upstream 33505 34459066 ~ 34477805 (-)
XLOC_010866 CR626886.1 coding upstream 131455 34557016 ~ 34565638 (-)
XLOC_010867 NA coding upstream 235499 34661060 ~ 34886237 (-)
XLOC_010868 NA coding upstream 490006 34915567 ~ 35330001 (-)
XLOC_010869 BX004992.1 coding upstream 669285 35094846 ~ 35094960 (-)
XLOC_010626 CR392024.2 misc downstream 13426219 20895112 ~ 20895175 (-)
XLOC_010856 BX530064.1 non-coding downstream 563109 33750067 ~ 33758285 (-)
XLOC_010855 NA non-coding downstream 584635 33735328 ~ 33736759 (-)
XLOC_010853 NA non-coding downstream 728814 33560863 ~ 33592580 (-)
XLOC_010874 NA non-coding upstream 1234328 35659889 ~ 35661552 (-)

Expression


Co-expression Network