CI01000092_00869289_00871464


Basic Information

Item Value
gene id CI01000092_00869289_00871464
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000092
NCBI id null
chromosome length 5370156
location 869174 ~ 871841 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000092_00869289_00871464.mRNA
GGATAAAAAACCATCTGAAAGAAATACCTCCAAACACCTGGCTGGCTTATCCATCGCCCAACCACAGGCAGCAACATCTCTCCTATTGGTTCCGCTGGCGGTGCAGGGTAAAGAAATGAAGGCAGTGGTTGACACAGGAAGCACCTTTACACTAATGCAGGAAACCCTGTGGAGACAGTTAGGAGGTGAGGCAACGACAAGAACAACAGACCCTCCCCAAAAGTTCATAATGACAGATGGCAAGGTTCATCAAGCTGTAGACCAGAGGAACATCACCTACAGGTGGCACAATAAGGTATGCAAACTAAATACCTTTATAATGAAAGATGCTCACTTAGCATTCCCTCTGTTGGTTGGATTGGATTTTTTGAGGGCTGCTGGTGCCATTCTGGAGCTTGCTCAGAATAGATATGGCCTGGAGACAGAAGGAGGTTACATGTATTACCCTTTCTACAACACTCAGCTGACTCCGGGGTTAGCTACCATGTCTGCTGGTCAAACTGGGCTCCACACTGCCACTATGCTCCAAGCTGGGATTCAAGTGGACAATCAAGAGGAGCTGCTGAAGCTGATGGCTGCCTGGCCGTGTGCTACCTCCAACATCCTGGGGAAGACAGATGTGAAAAAACACAAAATCAATTTGACGGATGAAGTACCCATTAAATCTCGAGCTTACCGTGTTTCCCCTTTTAAGAAGAAGATCACTGAGGAGCACGTGGACCAGATGCTCAAAAACCGTATCATCGAGCCCTTTTTTTCCTTTTTGGCGTCACCCGTCGTCCTGGTTCCTAAACCGAATGGAACATACAGATTTTGCGTCGATTACAGAAAACTTAACAGCAAGACAATACCAGAAACTTATCCCATGCCTCTTGTACATGACATCCTGGAGTCCATAGAAGGAGTTGCGTGGTTCAGCACCCTGGATCTCCAGTCGGGATATTCGCAGAGACTGATGGAGAAGGTGTTGGCAGAGCTTAGAGGGCAGTTTTGTTTTGTGTACATCGACAATATAATTGTCTTCACCAGATCCTTACCAGAACACACATCTCATCTAAACCTGATATTCCAAAGACTCACCCGAGCCAATCTTACTCTCAACATGAAAAAGTGCCATTTCTTCAAAAGACAGCTGAAATTCCTGGGCCATATTGTCTCCGAAAAAGGAGTTGAGGTCGACGCTGAAAAAACCAAAGCTGTCGTTCAGTATCCTCCACCCAGAGACCTAAAGGCACTCCAGCGTTTTCTTGGTTTAGCTGGCTGGTATTACAAATTCATACCTCATTTTGCAGACATCACAGCTCCCCTCAACAATCTGAAAAAGAAGGATGTCAAGTGGCAATGGACCCCAGAGTGTCAGGCCAGCTTCGAGAACATCAAAACCTTACTTCAAAGTCCACCTGTCTTAATCCAACCAGACCTCAACCAGCTGTTCCAGGTCCATACCGATGCCAGCGATGTGGGCCTGGGTGCCATCCTCTGCCAGCAAACACCTGAGGGAGAGAGAGTAATAGCAACATCAGGGGGTATTATATCGACAAGTTCCAATGAAGAATTCCAGATGGTTGTCCCTCAAGCCTTGATACCTGTATTACTTCCACGACAATCCGTTGGGTGGACATCTGGGAAGACTAAAAACCTTGCTGAGGCTGTTGGAAGTGGCTTGGTGGCTGTCGGTGCGTGCCGACGTCTGGAATTACGTCAAGGGATGTGAAACCTGTCAAAAATACAAGCACGACAATGCTAAACCCAGTGGTCTGCTGCAGTCAACACAAGTCACCGAGCCTGGTCAAATAATGGGAGTGGATCTGATGGGCCCTTTTCCAAGTAGCAAGAAACAAAACACCTACCTGCTAGTAATGGTGGATTACTACTCTAAATGGGTAAAATTGTTCCCCCTACGTGACAGTAAAACACAAAAAATTGTGAGAATACTCAGAGATTTTCACCCGATGGGGGGTCCCGAAGTATCTTGTGTCTGACCGGGGTTCTCAATTTACTTCAAACGTGCTCTCTGAATTATGTAACACCTGGGGAAGCATCCAGAAACTCACCACAAGTTATCATTCACAAACAAATCTGACAGAGAGA

Function

NR:

description
LReO_3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000092_00869289_00871464.mRNA True 2091 mRNA 0.47 4 869174 871841

Neighbor

gene id symbol gene type direction distance location
CI01000092_00868568_00868858 NA coding upstream 102 868030 ~ 869072 (+)
CI01000092_00779993_00785442 NA coding upstream 83732 779932 ~ 785442 (+)
CI01000092_00759626_00765910 LHFP coding upstream 102795 759626 ~ 766379 (+)
CI01000092_00658637_00661404 LHFP, LHFPL1 coding upstream 207770 658637 ~ 661404 (+)
CI01000092_00566301_00571771 NA coding upstream 296562 566165 ~ 573256 (+)
CI01000092_00887219_00908525 NA coding downstream 15378 887219 ~ 908525 (+)
CI01000092_00964013_00967452 NA coding downstream 92046 963887 ~ 980369 (+)
CI01000092_01034513_01049419 MAML2 coding downstream 162672 1034513 ~ 1049419 (+)
CI01000092_01050305_01051867 NA coding downstream 178464 1050305 ~ 1052460 (+)
CI01000092_01163367_01169844 NA coding downstream 291467 1163308 ~ 1170769 (+)
G303621 NA non-coding upstream 5859 858236 ~ 863315 (+)
G303620 NA non-coding upstream 11861 857076 ~ 857313 (+)
G303618 NA non-coding upstream 13726 855152 ~ 855448 (+)
G303496 NA non-coding upstream 220554 627751 ~ 648620 (+)
G303542 NA non-coding upstream 291722 576684 ~ 577452 (+)
G303592 NA non-coding downstream 38096 909937 ~ 910307 (+)
G303659 NA non-coding downstream 191313 1063154 ~ 1063471 (+)
G303667 NA non-coding downstream 199568 1071409 ~ 1071679 (+)
G303768 NA other downstream 443602 1315443 ~ 1316523 (+)
G304938 NA other downstream 1445951 2317792 ~ 2318234 (+)
G305584 NA other downstream 2795467 3667308 ~ 3667965 (+)
G305596 NA other downstream 2854506 3726347 ~ 3863135 (+)

Expression


Co-expression Network