CI01000092_02186791_02187942


Basic Information

Item Value
gene id CI01000092_02186791_02187942
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000092
NCBI id null
chromosome length 5370156
location 2186791 ~ 2187942 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000092_02186791_02187942.mRNA
AATCAGTTGGGTATTAAGCATCAATTGGCCAGTGCCTACCACCCGGAATCCCAAGGTGCACTGGAGCGATTCCACCAGACTCTTAAGTTGATGCTCCGAAAATGTTGTATTGAGACTGGTAGGGAATGGGTTGAAGGCCTACCGTTGATTATGTTTGCTGCAAGGGAGAGTGTCCAGGAGTTACTGGGTTTCAGTCCAGCAGAGCTGGTGTTTGGACACACCGTAAGAGGTCCTCTTAGGTTGATCAGTGAGCAGTTGCTGTCACAGAGTTCTTCACCCATGTCTATTTTAGACTATGTCAGTTCTTTCCGTGAACGACTTCACAAAGCCTGTGAGATTGTTAAAGCTCATCTTTCTAACTCCCAGTCTAGGATGAAAGTGCGGTATGATCGTAAGAGTGTGACACATACTTTCCAGCCTGGTGAGACTGTGCTCATCCTGCTTCCTGTACCTGGATCAGCATTGCAGGCTAGGTTCTCTGGACCTTACATGGTAGAGAGGAAGATAAGTAATACCAACTATGTCATCTCTACTCCTGATCGGAAGCGCAAAAGCAGGGTATGTCATGTGAACATGCTGAAGGCTTATGTTGCACGGGATGTGAGTAAAGTGAGTTCTCCTAAGCCAGTGCCTGTGTCTGCTGTTGTTTTGCCCCTAGCATATTGCCCTGAGGAGGATGGATTGCTGGCAAAAGATGCTCAAACTTCGTGTGCCCGTTTGCAAAATTCTGCTGTTTTGGCTAACTTGAATACATGCCTCTCCCATTTATCTACAAGTGAGTTTGAAGCCATCAGCCATTTGATTGGTAAATATCCCAGCCTTTATGCGGATGTGCCCCCTCAAACTACTGTACTATGTCATGACATTGATGTAGGTAACAGTCAACCAATTAAGCAGGTTCAATATCTACTTGATCATGATTTAGCTGTGCCCAGTCAAAGTCCATGGAGTTCCCCATGTATATTGGTACCTAATGCTGTGACCAAGCCAGATTCCTTCCCCCTTCCAAGAATGGAAGATTGTGTAGACCGAGTTGGTAGTGCACGTTACGTCACAAAATTAGACTTGCTAAAAGGGTACTGGCAAGTTCCCCTAACACCTCGTGCTTCAGAGATATCCGCTTTTGTCACCCCTGATAACTTCTTGCAATAC

Function

NR:

description
LReO_3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000092_02186791_02187942.mRNA True 1152 mRNA 0.46 1 2186791 2187942

Neighbor

gene id symbol gene type direction distance location
CI01000092_01989763_02003920 PGM2L1 coding upstream 182661 1989763 ~ 2004130 (+)
CI01000092_01985290_01986640 NA coding upstream 200104 1985290 ~ 1986687 (+)
CI01000092_01962495_01963651 NA coding upstream 222904 1962495 ~ 1963887 (+)
CI01000092_01912280_01944807 ABCG1 coding upstream 241574 1912280 ~ 1945217 (+)
CI01000092_01889654_01894899 NA coding upstream 291703 1889654 ~ 1895088 (+)
CI01000092_02279826_02285934 NA coding downstream 88570 2276512 ~ 2286079 (+)
CI01000092_02358901_02363225 NA coding downstream 169961 2357903 ~ 2364462 (+)
CI01000092_02395791_02407508 NA coding downstream 207659 2395601 ~ 2407642 (+)
CI01000092_02411552_02412283 NA coding downstream 223610 2411552 ~ 2413511 (+)
CI01000092_02418597_02419541 NA coding downstream 230466 2418408 ~ 2419996 (+)
G304828 NA non-coding upstream 35404 2149514 ~ 2151387 (+)
G304816 NA non-coding upstream 89852 2096640 ~ 2096939 (+)
G304686 NA non-coding upstream 107051 2079447 ~ 2079740 (+)
G304700 NA non-coding upstream 112186 2074331 ~ 2074605 (+)
G304694 NA non-coding upstream 132079 2054489 ~ 2054712 (+)
G304889 NA non-coding downstream 34463 2222405 ~ 2222761 (+)
G304894 NA non-coding downstream 44694 2232636 ~ 2232915 (+)
G304897 NA non-coding downstream 50795 2238737 ~ 2239186 (+)
G304901 NA non-coding downstream 56130 2244072 ~ 2244277 (+)
G304906 NA non-coding downstream 69424 2257366 ~ 2257650 (+)
G303768 NA other upstream 870268 1315443 ~ 1316523 (+)
G304938 NA other downstream 129850 2317792 ~ 2318234 (+)
G305584 NA other downstream 1479366 3667308 ~ 3667965 (+)
G305596 NA other downstream 1538405 3726347 ~ 3863135 (+)

Expression


Co-expression Network