CI01000092_02358901_02363225


Basic Information

Item Value
gene id CI01000092_02358901_02363225
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000092
NCBI id null
chromosome length 5370156
location 2357903 ~ 2364462 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000092_02358901_02363225.mRNA
GTTTAAAAGGGCGGTGCTCTCGGAAGATGGCGAGCTCATTCTGGCGTTGGCCTGCTGGCGTGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTATTTTGTTTGTTGTTTTGGCCTTGGGGCACCCTGAAGTTATGGCTCCTTTTATTTAATTTTTTTTGTATTCCACCTTAATAAATCTTTTGTGGAACTTATTTTGATGTCTGTGGTGATCTGTCGGCTGGAGTCGGTTTCCCCGTTATCCATCAAACTCACGTCAGCCTCTTTTCTTAATAGAACGGGGCGTAACAAATGGGGGCTCGTCCTGTCGTAAGGAATTGGGACGCGTTCGATGGTAACATGTTCGTCCTTTGTTTTTTTCTTGAGTATCGGGGAGAAGGATATAGAATAATTGAATTTAGTATTGAGGAGTTTCGACAAAAGCCTTCGCATGAAGTATTAGAATTATGTCGTAAGGAGGATTTGTACTTGATTGCTGATTATTATGAAATTTCGGTAGTAAAATCAGCTCGTAAGAAAGAAGTGCGGGACGTGATACAAGCTGCATTGATTCGACAGGGTGTGTTAACAGCAGTTCAAAATGTTGAAAGTGGGGAGACAGGGGAAAGTGCAAGTGATGAAGAGCAGGTTCCGAGCAGTGATCCGGTGTTTAGTTCGTTGAGTGGGAGCTTGCAACATGTTTCTGATTCATCGTTGCCTATGCCTTCTGCAACCTCTCCGGATTTTGACATTAGTAGACAGATCAACCTCGTCCCACCGTTTCGGGAGGCCGAGGTTGATTCATATTTTGGAGCGTTTGAACGCATTGCTGCTGCTTTGAGTTGGCCGAAGGAAGTTTGGCCTCTCTTGTTGCAATGTCGCTTAACTGGAAAGGCCCAAGAAGTTAGTTCCGCTTTGTCCCTCACCGACAGTCTCGATTATGAAAAAGTGAAGGCTGCTGTGTTAAGAGCCTATGAGCTTGTCCCCGAGGCTTATCGCCAAAAATTCCGTTTGCATGTGAAAAATGCCAATCAAACGTTTGTTGAGTATGCGCAGGAGAAAAGCGTGCTCTTTGATAAATGGTGTCAGGCCAGCAAAACAACAAATTTTGAACAGCTTTGTGAACTGGTTTTAATTGAAGAGTTTAAGAATTCGTTACCGGATAAAATTGTGGTGTACTTGAATGAGCAAAAAGTTTTGACCCTTGCTGAGGCTGCTGTGTGTGCTGACGAATTTGTATTAACGCACAAAAATGTATTCGTGGCACCCGCTCGTCGAGAGTCATCAAACTTTGTGAGTTCTGAGAGAACTTCAAAATCGTTTAAACTTTTGAAATCATCAGCGCAATCTGATGTTCGTGAGTCTTTTTATTGTCACGAAGCTGGCCATTTGATTGCGGCATGTCCCGTTTTGAAAAAGAAAAATAAGACTAAACCAAAAGGAGTTGGTTTTGTACGAACTGTTACCAAACAATCGAAGCCAGAAATTGATGCAGTTTTTGAACCTTTCATTCGGCAGGGAGTGATTTCTTTAACTGATTTGGAAAATGATCAAGTGCCTGCTACCATGTTGCGTGACACTGTCCAAGGAATTGAAATGGGAGTAGAAAAGGTTCCTTTGCATAAAATATATGTTCGATCTGAGTGGGTAACTGGTTTCGTAAAAGTGGCCGTTCGTTCGCAATTGCTTATAAATGGAGTAACTCTGATTATCGGAAATGACTTGGCAGGTGGGAAAGTTTTCCCTCTCCCTGAAGTCATCGAAAATCCTCTTTATGAATCCTCCGCTGTGTGTAAGGAAGAAGCAGATTTGTCAGTGTTCCCCGCCTGTGTGATTACTCGAGCTCAATCTCAAAAATTTCCAGCCGTAATTGATCTTTCTGATAGTTTTCTTGTTAATGAAAACGTGACTGATCCTGGTACATTACAGTCAGATGTGTCTGCTAAGCATCACCAACCTGAGATGTCCGCGTCTACGCCGCTGTCCGCTAGCAGTGGTGCTGATTTTGATTGCGCTAATATGTTATTATCTGTAGATCGTACGTTATTGGCAGTCGAGCAAAAGCAAGATCAGTCGCTTGAATTCTGTCGAGAGTCTGCCGTAAATAAAAAAGAAATTGTGAGTAAGCCAGTTGGTTATTACTTTGAGGATGGAGTGTTAATGCGGAAATGGACACCTTCAGTGTCGGATAATTCAGGTTGGGATACATTGTACCAAGTGTACATTCTGCCCAAATGTTTTCGAGAACAAGTGTTAAGTGTGGCACATGATAACGTGGCTGGCCATTTAGATTATGTTAGCTCGTTTAGAGAACGTTTGCATAAAGCTCGAGATCTTGCTCAGTCAGCTCTGTTAAACGCTCAGGTAAAGATGAAGGAGCATTTTGATAAAAATGCAGTTCCACGTTCTTTCGTGAAGGGAGACAAAGTTTTAGTTTTATTACCACTCCCTGGCTCTGCTCTGCAAGCAAAGTTTTCTGGACCTTATGTGGTGGAGCGAAAGCTCAGTGATACTGACTATATTATCTGTACTCATGACCGACAGAGAAAAACCCGTGTGTGTCACGTCAATATGTTGAAGCGTTATGTTGCTCGGGCCGAAATCTCTGCTTTTGTCACCCCTGACAATTTTCTAAATTATACTGTGATGGCTTTTGGGCTTCGGAATGCACCAGCAACGTTCCAGCGTTTAATGAACACCATACTGGCTGATGTTAAGAATTGTAAAGCTTACTTGGATGACATCGTGGTGTATTCGTCTAGCTGGAAGGAACATTTAGAGACACTAACTACTGTTTTTACGCGTTTGCTTAATGCTTCCCTCACGTTGAACTTGGCTAAGTGTGAATTTGCCAAGGCAACTGTCATGTATTTGGGAAAACGAGTTGGACAAGGACAAGTGCGTCCTATCGCCCAGAAAGTACAAGCAATTGTTGATTTTCCTGCACCTCAAACCAAGCGTGATCTTCGCAGGTTTTTAGGAATGGCGGGTTATTATAGAGAGATTCTGCCAAAACTTCTCTGATGTGGCTCTACCGTTAACCAATCTTCTCCGTGCCTCGCAAAAGTTCTTATGGTCTAATGACTGTCAACATGCCTTTGAAGCTGTGAAAAGTTTGTTGTGTAGTACTCCAGTGTTATCGGCACCGGATTACTCACGTGCATTTAAACTTGACATTGATGCTAGTGCCACTGGAGCCGGAGCAGTTCTTTTGCAAGATGACATTCACGGAGTTGAGCATCCCGTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTGTTTGTTGTTTTGGCCTTGGGGCACCCTGAAGTTATGGCTCCTTTTATTTAATTTTTTTTGTATTCCACCTTA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000092_02358901_02363225.mRNA True 4947 mRNA 0.28 6 2357903 2364462

Neighbor

gene id symbol gene type direction distance location
CI01000092_02279826_02285934 NA coding upstream 71824 2276512 ~ 2286079 (+)
CI01000092_02186791_02187942 NA coding upstream 169961 2186791 ~ 2187942 (+)
CI01000092_01989763_02003920 PGM2L1 coding upstream 353773 1989763 ~ 2004130 (+)
CI01000092_01985290_01986640 NA coding upstream 371216 1985290 ~ 1986687 (+)
CI01000092_01962495_01963651 NA coding upstream 394016 1962495 ~ 1963887 (+)
CI01000092_02395791_02407508 NA coding downstream 31139 2395601 ~ 2407642 (+)
CI01000092_02411552_02412283 NA coding downstream 47090 2411552 ~ 2413511 (+)
CI01000092_02418597_02419541 NA coding downstream 53946 2418408 ~ 2419996 (+)
CI01000092_02470059_02471839 OR112-1 coding downstream 104890 2469352 ~ 2471951 (+)
CI01000092_02661524_02662121 NA coding downstream 296921 2661383 ~ 2662183 (+)
G304955 NA non-coding upstream 6980 2350720 ~ 2350923 (+)
G304934 NA non-coding upstream 46262 2311399 ~ 2311641 (+)
G304930 NA non-coding upstream 57384 2300294 ~ 2300519 (+)
G304907 NA non-coding upstream 99216 2258273 ~ 2258687 (+)
G304906 NA non-coding upstream 100253 2257366 ~ 2257650 (+)
G304963 NA non-coding downstream 16796 2381258 ~ 2381543 (+)
G304966 NA non-coding downstream 29668 2394130 ~ 2394368 (+)
G304967 NA non-coding downstream 31448 2395910 ~ 2396126 (+)
G304968 NA non-coding downstream 37733 2402195 ~ 2402505 (+)
G304969 NA non-coding downstream 40676 2405138 ~ 2405562 (+)
G304938 NA other upstream 39669 2317792 ~ 2318234 (+)
G303768 NA other upstream 1041380 1315443 ~ 1316523 (+)
G305584 NA other downstream 1302846 3667308 ~ 3667965 (+)
G305596 NA other downstream 1361885 3726347 ~ 3863135 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
tiger barb (Puntius tetrazona) G38767 NA non-coding NC_056703.1 CM032072.1 23345589 ~ 23345797 (-)
mexican tetra (Astyanax mexicanus) G42605 NA unknown NC_035901.1 CM008304.1 14895062 ~ 14899248 (+)