CI01000092_02661524_02662121


Basic Information

Item Value
gene id CI01000092_02661524_02662121
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000092
NCBI id null
chromosome length 5370156
location 2661383 ~ 2662183 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000092_02661524_02662121.mRNA
GTATAAAATGTTCAAGTTTAAATCAGAAATGTTCCAGAAGGGGGTGTGGCTTCACTGTGATTCCCATGGGTGGGATCAAGAATTTAAAATCCAACAGGAGTTTGGAGTTTCAGATTCACACCATCACCGAATCGAAAGACAATGAAGAACTCCACTAAGTCATCAGAATACACGCTGGAATACGAGTACTACTACGATTACATGGAACCGGTCTTTGTGGATGCCAGTACACTGAAATTCAATTGTCCTGATATTCTGGATCATTCTAGCTGCATTTATAGGGTTCTTCTTCTTGATTTTGTCATTTATATCACACTCGGGGCAACTACCAAGGGGTCCTCATGTCAAAAAATCTGGTTTGCCACTGATGAAAGGCTATGGATCTCACCAGAAAAGATAGAAATAAGAAGCAACTTCAAGACGACACTAAAGCCATGATGATCTTTAGTGAAAACAGACACTGTAGAAGCATCACTGCTGACAACTGCCA
>TU346685
AATCGAAAGACAATGAAGAACTCCACTAAGTCATCAGAATACACGCTGGAATACGAGTACTACTACGATTACATGGAACCGGTCTTTGTGGATGCCAGTACACTGAAGTACAACAGATATTCAATTGTCCTGATATTCTGGATCATTCTAGCTGCATTTATAGGGTTCTTCTTCTTGATTTTGTCATTTATATCACACTCGGGGCAACTACCAAGGGGTCCTCATGTCAAAAAATCTGGTTTGCCACTGATGAAAGGCTATGGATCTCACCAGAAAAGATAGAAATAAGAAGCAACTTCAAGACGACACTAAAGCCATGATGATCTTTAGTGAAAACAGACACTGTAGAAGCATCACTGCTGACAACTGCCATTAAACCATC

Function

NR:

description
hypothetical protein cypCar_00040162

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000092_02661524_02662121.mRNA False 490 mRNA 0.41 3 2661383 2662173
TU346685 True 382 lncRNA 0.40 3 2661512 2662183

Neighbor

gene id symbol gene type direction distance location
CI01000092_02470059_02471839 OR112-1 coding upstream 189432 2469352 ~ 2471951 (+)
CI01000092_02418597_02419541 NA coding upstream 241387 2418408 ~ 2419996 (+)
CI01000092_02411552_02412283 NA coding upstream 248600 2411552 ~ 2413511 (+)
CI01000092_02395791_02407508 NA coding upstream 253872 2395601 ~ 2407642 (+)
CI01000092_02358901_02363225 NA coding upstream 296921 2357903 ~ 2364462 (+)
CI01000092_02721458_02724152 NA coding downstream 59220 2721393 ~ 2724152 (+)
CI01000092_02739990_02745224 NA coding downstream 77817 2739990 ~ 2745247 (+)
CI01000092_02818349_02838255 NA coding downstream 155447 2817620 ~ 2838255 (+)
CI01000092_02958119_02966042 WRB coding downstream 295851 2958024 ~ 2966463 (+)
CI01000092_02977237_02979350 SH3BGR coding downstream 315064 2977237 ~ 2979378 (+)
G305071 NA non-coding upstream 44223 2616237 ~ 2617160 (+)
G305084 NA non-coding upstream 137198 2509042 ~ 2524185 (+)
G304987 NA non-coding upstream 199275 2461861 ~ 2462108 (+)
G304984 NA non-coding upstream 212730 2448386 ~ 2448653 (+)
G304980 NA non-coding upstream 220115 2440977 ~ 2441268 (+)
G305137 NA non-coding downstream 40592 2702765 ~ 2702979 (+)
G305171 NA non-coding downstream 55801 2717974 ~ 2718193 (+)
G305172 NA non-coding downstream 56269 2718442 ~ 2718646 (+)
G305133 NA non-coding downstream 65130 2727303 ~ 2727705 (+)
G305180 NA non-coding downstream 72264 2734437 ~ 2734688 (+)
G304938 NA other upstream 343149 2317792 ~ 2318234 (+)
G303768 NA other upstream 1344860 1315443 ~ 1316523 (+)
G305584 NA other downstream 1005135 3667308 ~ 3667965 (+)
G305596 NA other downstream 1064174 3726347 ~ 3863135 (+)

Expression


Co-expression Network