CI01000092_02721458_02724152


Basic Information

Item Value
gene id CI01000092_02721458_02724152
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000092
NCBI id null
chromosome length 5370156
location 2721393 ~ 2724152 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000092_02721458_02724152.mRNA
CTATAAAAGTTCAGTCGATTTGCGATAAAAGTTTGTGACAGAACATCAGCGAGTGATCTGACGCAATGGGGCAGTGCACATCTCACAGCTGCATTGCAGTCCAAGATCCTTCTGCTTGTATGTCACCAACGCCTGTCCCTGAGAGACTAGAAAAGAAGAGAGGGAGGCTTTATAGATGGGCTTTTTCTAGGAAATCCAAGAAAACGTCCATCGAAGCCCAACAGGGTCGGTGCAGAATTTGCAGGAGCCAACCACCTCAGAGATGCTCTGATGGTGTAGATGAACACAAGAACAACACCCAGAGCATCAACGCTCCCAGCAACAACAACGTTGTTCATTCACTGAACAAAGCTGAAGAGAGCAGTGACACTAACACTTCAGTGTACAGCCATGTGTCTCCCTTCAGCGGTGTGAGGATAGTTAAAGTAGATGTCCATAGGGCTGAAGACAGCAGTGCCACTACACTGCACAGCCATGTGTCTTCCTTCAGCACTGTGGAGAAAGTTAACAAAGATGAAGCTGAAGAGAATAGCAACACTTCAGTGTACAGCCATGTGTCTCCTTTCAGCGCTGTGGAGAAAGTTAACGAAGATGTTCCTAAAGCTGAAGAAAACAGCAACACTTCAGTGTACAGCTGGCACAGCTGTGTTTCTACCCTCAACACTGTGCAGGAGGCTGATGCTCCCAGACAAGAGCAAGAGGACATCAACGTGAACAACGGTACTTTTCCAACTGTGTCATCCATTACTGAAGGGGACCTCAGCGCTCCTTTGCTATCGGACGACACTTTTTGGAAAGCTGAGGATGAAATTATCAATATAAGTTCAAACGCAAAGAGAGAACAGGTGGCACTCAAATATGTGGCGAAGGAAGAATGCTATGAAAGTGAGCGACTTGGTCTATTTGGCAAATCGCTTCCAAATGAGGTCGCTATGATGATTCAGGTGAGCAAAGGCCCCAGCGTTCCTCAAATAATAAAGCTGCTGGACTGGTATGAGACACGGAAGGAATACATACTGGTCATAGAGCGGCCCACGCCTTGCAAAGATCTGCGGAAGTATTTAGTGCAGAATGATGGCAGAATCAGTGAGTCAAAAGCACGAGCTGTGATGCATCAAGTTGTTACTGCTGAAAGAATATGTTTTGAAAGGGGAGTCTTCCACAGCGACATCAAGCTTGAAAACCTGCTAATCAACGAGAACAGCTTACAGGTCAAATTAATCGACTTCGGTGTTAGTAGAAGCTTGAAGACGTTTGGTTATACGAGGTACAATGGCACAAAACTTTACGCTCCCCCTGAGGCTTTCCACAGAAGATGGAGGTACCACGCCAAGCCGGCAACAGTATATTCTTTAGGTGTACTGTTGTTCGTGTTGCTGTTTGGGAAGTACCCTTACAAGGTGAAACCTGAGGCCCTTGCCAACATCTTGAAAGAAGCAGAAATTTCCAAAGAAAGCAAAGAACTGATATCTTTGTGCATGGAAAAAGATCCAGCCAAGAGGATTGACTTGGACAAGATCCTCGACCATGACTGGTTCCAAGTTTTGCTCCTGAAGCCGGAGAGTCAAAACGAGGAACCCACA

Function

NR:

description
novel protein similar to vertebrate pim oncogene family

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000092_02721458_02724152.mRNA True 1583 mRNA 0.46 5 2721393 2724152

Neighbor

gene id symbol gene type direction distance location
CI01000092_02661524_02662121 NA coding upstream 59220 2661383 ~ 2662183 (+)
CI01000092_02470059_02471839 OR112-1 coding upstream 249442 2469352 ~ 2471951 (+)
CI01000092_02418597_02419541 NA coding upstream 301397 2418408 ~ 2419996 (+)
CI01000092_02411552_02412283 NA coding upstream 308610 2411552 ~ 2413511 (+)
CI01000092_02395791_02407508 NA coding upstream 313882 2395601 ~ 2407642 (+)
CI01000092_02739990_02745224 NA coding downstream 15838 2739990 ~ 2745247 (+)
CI01000092_02818349_02838255 NA coding downstream 93468 2817620 ~ 2838255 (+)
CI01000092_02958119_02966042 WRB coding downstream 233872 2958024 ~ 2966463 (+)
CI01000092_02977237_02979350 SH3BGR coding downstream 253085 2977237 ~ 2979378 (+)
CI01000092_03007267_03029327 NA coding downstream 283115 3007267 ~ 3029327 (+)
G305172 NA non-coding upstream 2747 2718442 ~ 2718646 (+)
G305171 NA non-coding upstream 3200 2717974 ~ 2718193 (+)
G305137 NA non-coding upstream 18414 2702765 ~ 2702979 (+)
G305071 NA non-coding upstream 104233 2616237 ~ 2617160 (+)
G305133 NA non-coding downstream 3151 2727303 ~ 2727705 (+)
G305180 NA non-coding downstream 10285 2734437 ~ 2734688 (+)
G305183 NA non-coding downstream 13360 2737512 ~ 2737868 (+)
G305187 NA non-coding downstream 23349 2747501 ~ 2747707 (+)
G305188 NA non-coding downstream 24209 2748361 ~ 2748594 (+)
G304938 NA other upstream 403159 2317792 ~ 2318234 (+)
G303768 NA other upstream 1404870 1315443 ~ 1316523 (+)
G305584 NA other downstream 943156 3667308 ~ 3667965 (+)
G305596 NA other downstream 1002195 3726347 ~ 3863135 (+)

Expression


Co-expression Network