CI01000092_02818349_02838255


Basic Information

Item Value
gene id CI01000092_02818349_02838255
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000092
NCBI id null
chromosome length 5370156
location 2817620 ~ 2838255 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000092_02818349_02838255.mRNA
GCATAAAGCAGAAAGGGGGTTTGCTGCTTGACAGTGACCAGAACCTGGCTGACAATCTGAACAGGTTCTTTAATAGATTTGATAACCCCACGTCACCCCAGCCCGTCACATCCGGTCTGCTACCTGGTAATCTCAGCCTCAGACATCATGCCCACGGACCGTTGGCTGAATGTATGATAGATATAACACACTTAACTGGAAACACTTCAGGATTTTCTAAGTCGTCATCTGACTGGTTGAATTCTAAAGGATGTCCAGGAGATGTGCGTGTTCTTTAACAGTCCACCTGGAAACAATGCCGTGACACCAAACCCCCTCGTAGAAGAAGAACGCCGTTGTGTTTACAAGTGTGACAATGAGCGCTTACCAGGATCAACTAAACTCTGGATTTTCAAAAGTATGTGAAGTTCACGGCTCCATTGTTGCAGTAAACTTGCACAATGTTCTTGAATTAATAATTTATTAGATGCACGCTGGTCTGTTATTGTAAGGGCCATCGAATTTACATTTTCACGCCCCTACACATGACTTGGAATAAAACGAACTGTGATTGGTTGCATTACATGTCAGTCAAACGTCCTCTTGGGCAGTCCTTGGCAAATGAAAGCTGTGATAGAGTCCAGACCAGTCCCTGGGCTGTGGAAAACATCTTGTCTGATCCCTGTTCCCAAGAAGAGACACCCCTTTGACCACAACGATTATAGACCTGTAGTGCTCACCTCACATATTATGAAGATGTTCGAAAGACAGGTTCTCTCCTACATCAAGGCTAGCGTGTCAAGTTACATGGATCCTCTACAGTTTGCATATCAGTCCAACATGGGTGTAGATGATGCCCTCATTTACATGCTACAGAGGACCTATGCACATCTGGACACTCCTGATGCATCCGTGAGGTTCTCATTCTTTGATTTCTCAAGTGCCTTCAATACGATCCAGCCTCGATTGCTATGTGAGAAGATGAGGAAAATGCAGAACAGTGTCTCCAATACTATCCTGAGTTATATCGTGGCACCGCAAGAAACTGTTCTGGCCCCGTTCCTGTTTACCATCTATACGGCAGACTTCCAGTACAATACTGGCAGCTGCTTCCTCCAGAAATTTTCAGAGGATACAGTAGTTGTCAGTCTAATTAAGGGAGGTGAAGAGGAGGAGTACAGGAGATCAATTAAGGACTTTGTGTTTCAGAGCAACCACAACCATCTCCACCTTAATATCTCAAAAACCAAGGAGATGGTTGTGGATTTTAGGAGGAAGAGGACACAGTCAATTCTGATCACCATCCGGGACATGAAGTGGACATGGTCTCCAGTCACAGATATCTTGGTGTGCAGCTTGACAACAAGCTGGACTTGGAAGAGCCACATGAAGACAGTGTACAAGAAGGGTCAAAGCCGAATTTATTTCTTAAGGATGCTGAGGTCATTTAACATCTGCCGTCCCCTACTGTGCAATCTCTACAAGACAGTGATGTTTGAAAGACAGGTTCTCTCCTACATCAAGGCTAGCGTGTCAAATTACATGGATCCTCTACAGTTTGCATATCAGTCTAACATGGGTGTAGATGATGCCCTCATTTACATGCTACAGAGGACCTATGCACATCTGGACACTCCTGATGCATCTGTGAGGTTCACATTCTTTGATTTCTCAAGCACCTTTAATATGATCCAGCCTCGATTGCTATGTGAGAAGATGAGGAGAATGCAGAACAGTGTCTCCAATACTATCCTGAGTTATATCGTGGCACCGCAAGAAACTGTTCTGGCCCCGTTCCTTTTTACCATCTATACGGCAGACTTCCAGTACAATACTGGCAGCTGCTTCCTCCAGAAATTTTCTGACGATACAGAAGTTGTCGGACTAATTAAGGGAG

Function

NR:

description
orf1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000092_02818349_02838255.mRNA True 1876 mRNA 0.45 4 2817620 2838255

Neighbor

gene id symbol gene type direction distance location
CI01000092_02739990_02745224 NA coding upstream 72373 2739990 ~ 2745247 (+)
CI01000092_02721458_02724152 NA coding upstream 93468 2721393 ~ 2724152 (+)
CI01000092_02661524_02662121 NA coding upstream 155447 2661383 ~ 2662183 (+)
CI01000092_02470059_02471839 OR112-1 coding upstream 345669 2469352 ~ 2471951 (+)
CI01000092_02418597_02419541 NA coding upstream 397624 2418408 ~ 2419996 (+)
CI01000092_02958119_02966042 WRB coding downstream 119769 2958024 ~ 2966463 (+)
CI01000092_02977237_02979350 SH3BGR coding downstream 138982 2977237 ~ 2979378 (+)
CI01000092_03007267_03029327 NA coding downstream 169012 3007267 ~ 3029327 (+)
CI01000092_03080030_03082866 PCP4 coding downstream 241307 3079562 ~ 3083624 (+)
CI01000092_03329908_03348045 NA coding downstream 491653 3329908 ~ 3348319 (+)
G305220 NA non-coding upstream 18740 2798634 ~ 2798880 (+)
G305219 NA non-coding upstream 20680 2796686 ~ 2796940 (+)
G305206 NA non-coding upstream 31413 2773011 ~ 2786207 (+)
G305188 NA non-coding upstream 69026 2748361 ~ 2748594 (+)
G305187 NA non-coding upstream 69913 2747501 ~ 2747707 (+)
G305244 NA non-coding downstream 807 2839062 ~ 2839329 (+)
G305164 NA non-coding downstream 8611 2846866 ~ 2849443 (+)
G305143 NA non-coding downstream 33003 2871258 ~ 2876023 (+)
G305262 NA non-coding downstream 39177 2877432 ~ 2877839 (+)
G305148 NA non-coding downstream 40017 2878272 ~ 2883232 (+)
G304938 NA other upstream 499386 2317792 ~ 2318234 (+)
G303768 NA other upstream 1501097 1315443 ~ 1316523 (+)
G305584 NA other downstream 829053 3667308 ~ 3667965 (+)
G305596 NA other downstream 888092 3726347 ~ 3863135 (+)

Expression


Co-expression Network