CI01000092_03551674_03573437


Basic Information

Item Value
gene id CI01000092_03551674_03573437
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000092
NCBI id null
chromosome length 5370156
location 3551674 ~ 3573492 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000092_03551674_03573437.mRNA
GAGATCAGTGTGTAAGATTATGAAGTTTACAGCAGTGAAAAGTAATTTCATGGTCCAGGGCTCTTCTGTTGGACCAATGATGATGAAAGAGTCAAAAGATGAATTCACAACCAGTGGGAACAGAGAAAATGATTCCAGCACAGTACCCAACGGGGTCTCCAGGGATCAGACAAAAGTCCTGAGTCTACTGCAAGGTTTACGCTTGTGTCAGGATGCCTGGGCTCCCAAGAGCCCTTGGGACAAACATGGGGCTCATGCCGCTCTGTGGGGCAGACCTTCTGGGAGTTTCCTGGTGGTCCAAGGGTCTTTGCCTCAAGACCAGCTTCTGTGCGTGTCTGTAGGGGACAGCGGGGAGCCGGTCAAAGAATTCCCCATCATAGCCACTGGAACTGCGCTTCAACTGACAACGTCACATCTGGCTTTCCCTGATCTCTTTCAGCTGCTGCACTTCTATACACTGAGCAGGGATGTTTTACCTGTCTGTTTGTTGGTTCCCTCGTGGGTTTACACCCTTAACAATCTACCAGATCATCTTGTTCCTCTGCTTGGTCCAAATCTGCAGGCTAACAGTATGACTTCAGAAACACAAGACACTGCAGAAATGCCAGAAACAGTCCTGTGCACCATACAGGTTACAGCCGCCAGTGGTGCGCTGTGCTTCATCAATCCCTTGTACCTTCAAGAGCACGGGGATGATTGGCTTACTCATTCTTCATCCAACCCAATCAATCGTCCAATCAGGCGAGACAAGCGGTTGAGTACCACAAGAGCATGGGAAGGGAGAGGACTGAAACAGAGGTCATTTACACTAGCCAAGGACAACTCTAGCAGTTTTGACCATGACAGAGGATCATTTGAGAAGAGTCCAGTCACTCCAACTACCCCAAGCGGAGTTGTGCTTCGAAGGGCGAGTAACGCCAGCACGGAAGACCCCCTAAAAAGAGCAAGCATAGACTCCATTCAGAGCCCTCTCCCTCAGTCGCCACACCGTGTGTCGTGGATAGAGGACAAGATATGGCTGAATTCCTCTCTGCTTCAACCGCCCTGCTTAGAGCTGGACTCGCTGTCAGTCAGCAGTATAGAGGAGGAGTATGAACAAGCTTCAAGCCCGTCCCCATCCCTACCTTCGCCCCGCTTCCATTTGGCAGATAAGATGAAGAACCGCCTCTCGGCAGTGGGTCAGGCTCTAGGTGGGCTTGTGTCGCCACAGCGAAGACTGAGTAAACGGGTTCAGGAGATGGCGGAACGGAAGGGTGGGGCTTTTGCAGATGCTGTCAGGGGATTTGTAGAGCAAACTCTTACAAGTGGAACCGATGCTGGAGTGACCTCCACCGAGATGCTGCAGGAAGTGCGTTCGGCTCTCACTGCCCTGAGGGAAATGCTGTTTGATTGTCCAGAGATCCAAAGCATCACAGACAGCTTTGGAGACACTCCAGATTTTGAGCTGGATGCTATGCTGGAGCTTGCCTTACATAAAGTAGCTTTGAAGCCAGTTTACGCTCACCTTTACGTGTATCTAAAGACAGCCCGCAGGGATGATGGCACTCTGCAGCGTTTAGAAACCAACAAGAGCACACTGGAGAACCGCAGCCTGGAGGAGCTGGAGGGCGCAGCCGGGGCCGGGGTACCTGATTCCAGCATGATGGAAAAGATCCAGCAACGCTGGACTGCAATGCATGAGGCCTACTCACCTAGTAAAAAAGTTAACACCCTGCTCAAAGTCTGCAAGAATATCTACCATAGCATGAATGCTAATGCTAAGCCTGGAACGGTTTTCGGGGCAGATGACTTCCTGCCGTGCCTGACGTGGGTGTTGCTGCGTAGTGATGTAGCTATACTACAGGTTGACACGGACTACATGATGGAGCTGCTGGACCCCATGCAACTACAAGGAGAGGGTGGCTACTACCTTACGTCTCTCTACGCTGCCCTTTATTACATTAGCAGCTTCCAGCCTCGTCTAGCGAAGCGGCAACTCAGTGCAGAAGCACACAAGTCTCTCAGCCAGTGGCACCGCAGACGCACACTGCATGGCAATCAATCACGCCACAGCCGAAACCGCAGGACCATACGGAGGCATGGACCGGCAGAAGGAACAACGGAGGACGGGGACTGTTTAAATGAGAGCAAAGAGTCCAGCAGTCTGACTGACGTCATGCCAGCCACCCATAGCATTCAAGAACCACTGCAGGGTTTGGATGAAGAATTAGAGGCTGTAACAGAAGAAGAGGAGGGAAGTGCAGGTCCAGAACAAATACAGTTAACAGAGACACTGGACCTCACCAGTCCCGAAAGAGGTGATGGAGAGTAAGCTGGAAAGAAGACAACTGAAATTTGCAGGATCCTAAGTTAATACGCACGTGGTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000092_03551674_03573437.mRNA True 2366 mRNA 0.51 12 3551674 3573492

Neighbor

gene id symbol gene type direction distance location
CI01000092_03532136_03542761 SIRT2 coding upstream 8791 3532136 ~ 3542883 (+)
CI01000092_03478431_03479274 GJD1A coding upstream 71881 3478431 ~ 3479793 (+)
CI01000092_03433283_03442900 GLTSCR2 coding upstream 108714 3433283 ~ 3442960 (+)
CI01000092_03329908_03348045 NA coding upstream 203355 3329908 ~ 3348319 (+)
CI01000092_03080030_03082866 PCP4 coding upstream 468050 3079562 ~ 3083624 (+)
CI01000092_03693715_03694890 NA coding downstream 117058 3690550 ~ 3695228 (+)
CI01000092_03725440_03728304 NA coding downstream 149551 3723043 ~ 3728325 (+)
CI01000092_03816152_03827312 AXL coding downstream 242660 3816152 ~ 3827361 (+)
CI01000092_03828205_03831437 NA coding downstream 254713 3828205 ~ 3831775 (+)
CI01000092_04205017_04213986 NA coding downstream 631525 4205017 ~ 4214128 (+)
G305529 NA non-coding upstream 106557 3444826 ~ 3445117 (+)
G305499 NA non-coding upstream 151186 3399821 ~ 3400488 (+)
G305493 NA non-coding upstream 161436 3384815 ~ 3390238 (+)
G305488 NA non-coding upstream 172768 3376206 ~ 3378906 (+)
G305468 NA non-coding upstream 194094 3357325 ~ 3357580 (+)
G305558 NA non-coding downstream 13380 3586872 ~ 3587109 (+)
G305561 NA non-coding downstream 24220 3597712 ~ 3598766 (+)
G305562 NA non-coding downstream 25397 3598889 ~ 3599275 (+)
G305565 NA non-coding downstream 84572 3658064 ~ 3661242 (+)
G305581 NA non-coding downstream 88805 3662297 ~ 3662516 (+)
G304938 NA other upstream 1233440 2317792 ~ 2318234 (+)
G303768 NA other upstream 2235151 1315443 ~ 1316523 (+)
G305584 NA other downstream 93816 3667308 ~ 3667965 (+)
G305596 NA other downstream 152855 3726347 ~ 3863135 (+)

Expression


Co-expression Network