CI01000092_03693715_03694890


Basic Information

Item Value
gene id CI01000092_03693715_03694890
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000092
NCBI id null
chromosome length 5370156
location 3690550 ~ 3695228 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000092_03693715_03694890.mRNA
GTATATAAATGGATTCATCCAAATGCATCAGAAAACATATGGTTAGACGTTGAGCAAACAATTTGTAAAGATATTCGCATTTCAGATTTACCATTCTACAGTAAGAGAATCAAAAAACACCCGTTTCAAAGCACCAACAATAGCAGCGGCTCTGACAGCTTGGTGGATATTTCACCAAATCACAAACACCCCTCTTACACCATCTAAATACACCTCCATTTGGGATAACCCAGGTTTCACTGCCAACAAGAAGCCACTTAACTTACATACACGGGCAGTCAAATCAAATCATCCATCCAATCAAAAATTAATACGTGGACCATTAACCTAGACCTTTCACCTCCTATCTCAGAGTTAATTAATACCCTCCTCAAAGAAACTACTGTCCAAAATCTATAGAATAATATCAAAATCAGATAATACACTATGCTTACCATATGCTAAATGGGAAACAGATTTATCCATTACTCCTGATCCTGATTTCTGGAAACAAATCTGTAAAAATATTTACTTTATGACAAATAATCCCAACCTACAACTCATACAGTATAAGGTAATCTCACCTAACTGGATGGAAATTGTCTAAAATGGGATTCACTTCAGAAACTTGTTCACATTGCTCACAAAATAACCCAGACACATATGTTCATGCCCTTTGGTATTGCACCCCAATTAAAAAATTCTGGGAAAATGTCACCGAATCACTATCTGTCTTTATGGGATGTCACATCCCAATGTCTCCCTCCCTTTGTCTATTAGGTGGTACATCCATAATCAATTTAAGCGACATAAACAAGCAGTTACTTTTAGCGGCGCTAACTATTGCCAAGAAAACTATCTTCATGAACTGGAAATCAAGGAATTCCCTACATATTGCATCCTGGAAAATCTTACTAATAGAATACATCTCCATGCAAACACTAGAATTACATCCCTCATGGTCATCTCTCATTACCCCCCAACAATCATAAATCTGCTGACCTTCTTTGTCTGGGCCTTGGGTCCTGTGCCCTGCAGCGTCTCTCCCTGACACCTTATTGTGGCATGATATGCACTGGGGTCTAATTTACTGTATGTGGTGATAATGGATGAATCAGTGGTAACCCTAATAATTAATAATAATGGTAATAATAATAATAATTATTATTTGCCCTCTTCCTCATCCTCAACCCCCCTCCCCATTTCTTAGCAACATTATTATTATTATTATTATTATTAATATAAATGTTATAAGTACTATTATTATAATTATTGTTGTCAAAAGTTTTTGTTGTCCTTATTGTTTTATTGTTACACTGGTTATCTGTTATCTTCTTACTCTTTGATTTATATTTGATCATATGTCTGCACCTTAACACCCAGATACACTCACACACATACACATAAACACATACACACACACACGCATACACGTGCACATACATACACGTACAGGAGTTTGTAACTAGACTTGTAGACGAGTTTGTAACTAGATCTAGCTACAATCTTGTAGACGAGATTGTAACTAGACTTGTACTTATTGTTGGCTGTTTGTAATGCATGTTGGCTGTTTGTAATGCATAATATATGTGTTTGTAATGCAAAAAAAAAAAAAAAAAATGCTGGATCTCTGAGCATGTCGCTTGCTGGCCATACCCCCAACAAGCACCGCTTGCCGGCCACACCCCCACTTTCATTGAGAAAGGCGTGAGAGCGAGCTCAATGCTGACAGCGCTCAGCTGAATATGACATGACGCTCTCCCATGACTCAGGTGAGACTCTTGGAATATATATTCACTCTAAAAGAGCGTATTTCTCCAGCATTTGTTGTAATATGCCCAATCTCTGAGCATGTCGTTTGCCGTCCACAACCCCGCGAGCCGCGTTCATTGAGGGCGTGTGTCTCACGATGAGAGCACTACAACGAGCTCAATACTGACAGCGCTCAGCTGAATATGACATGACGCTATCCCCTGACTCAGGTGAGACTTTATATTCATTCTAAAAGAGCGTATTTCTCCAGCATTTGTTGTAAAATGCCAAATCTCTGAACGTGTCATTTGCCAGCCACACCCCCGCGAGCCGCGTTCATTGAGGGCGTGTGCTCTCACGATGAGAGCGCTACGAGATCAATACTGACAGCGCTCAGCTGTATATGATATTGCCGCTCTCCCCTGACTCAGGTGAGACTTGTGGAATATATTAACTCTGAAAGAGCATATTTCTCTGGTGTTTGTTATTAAATGCCAAACCTCTAAGCGCTTCGCTTGCCGGCCCCGCCCCCGCAAGCCGCGTTCATTGACGGAGTGTGTTCTCACTATTCCTCTTCCACCCCATGTGTGCATCACAGTCCCTCACAGTGATTCAGTTCTAGAACCAATCCAGTCCCTTGCCACGCGGTCCGAGGCATGGCAGGCCATCCCCGGAGTGTCAGCTTGGGTGCTGGACATAGTAAAACGAGGTTATGTGCTCCAATTCGCTCAACAGGCTCTGTTATTCAACGGCATGGTTCAAACCTCTGTGGAAAGCAGGGACGCGCTCGTCCTGTGTTCCGAGGTAAACACCATGCTGGCGAAAGGAGCCATAGAGGTGGTTCCCCCAGCACTGAGCGAGTCAGGTTTCTACAGCAGGTACTTCCTCGTTCCCAAAAAGGATGGCGGTCTCAGACCCATCCTCGATCTCAGACATTTGAACAGGGCCCTGACAAAGCGCACATTCAGAATGATCACTTTGAAGCAGATCTTCCCGCAAATACGCCGGGAGACTGGATCTTTACCCTGGATCTGAAAGACGCTTATTATCACATCCAGATAGCCCCCCATCACAGGTGATTCTTGAGATTTGCCTTTGAAGGGGTGGCATATTAATACACGGTTCTTCCATTTCGGCTATCTCTAGCTCCCCGCACTTTTACGAAGTGCATGGATGCGACTCTCTCCCCTCTGAGACAGATGGGTGTGCGCATACTGAACTACCTCAACGACTGGCTCATTTTGGCCCAGTCGGAGGCGGAGCTAATATCTCACAGATCCATCATCCTCAACCACTTGGAGTGCTTGGGGCTCAGGGTCAATTTTCCAAAAGAGCTCGTTATCTCCCAGCCAACGTATCTCGTTCCTGGGGATTATTTTAGACTCAACCCACATGAATAATTTGTATGTGCCCGCTGCAGTTCTAGCTGAAACCATGGGGCCCGTCCCAAGCCTGGCGACATGGTCGTTGCTTGCTCAAGGGTGTGGCAATTGGGACGATGAACAAGAGGAAGGTCGTTGGGGAGCTCTGTGTGACAACCGTCCGGCCTTTGGCACTTGGAACGGCCCGGAAAGCAAGCTTCATATCAACCGTCTGGAAATGATGGTGGTATATCAAGCTCTCCACGCCTTCCTTCCTCTCCTGGTGGGACACCATGTCTTGGTCAGATCGGACAGCATGACGGTGGTGTCCTTCATAAATCACCAGGGCGGGCTCTCTTCAAAGCCCCTCTACACTCTAGAGAAAACCATCCTAGAGTTGGACCAATGCAACCTGCTCTCACTGAGAGCAGCGCATATACAGGGCGTACTGAACACAGGGGCGGACATGTTGTCCCGGAGCAACCTTCCCTCGGAGGAACGGTCGCTCCACCCCCGCACGGTTCAGAAAATTTGGGTCGACCTCTTCGCCTCAGAAGACAATTCTCACTGGCCAATATATTTCTCGAAAGCCAGGGATGCGCTGGACCACGACTGGCCCAGCCTCCCCCTTTATGCTTTTTCCCCGATTGCGCTGATTCCCGAGAGAAGTAAGTCCTGCTTTGGACAGCTTGGTAGAGAACAGGATCCCTCTGTATTTAGTACCTGTGAAACTTGTGGAGAGAATCTTGAGACAGGCTACACTGGGAACTACCCAAATGCAACAAGTACACTTGGCCTATGGTTTGGATAGTGCCATGCCAGTCCATGTAGACCCAAAAGCTGGTGAAATTGGTTTCCGGTTAAACTTTCTAATTTTTGATATTGGGAACATACAACGTGTAGTCCACTCCCCTAACTTTCTCCCATCACTACACACAACATAGACTAATCAGCAGCATGCCCCTGCTAACTTTGCTATGCAGTCCTTTTAGAATCCCCCACTGTGTAGATTAACTCCCTTTTTTTTTTCTTTACTTTAGAGTCATCTTTAGATTACAATTTCTCTAACCTGATATAATTCTTGTTAGTCCTACCATAGGTGGTTAGCACTACCTTTATAGCTATTAAGTCTGTCCTTTAATAACTATT

Function

NR:

description
reverse transcriptase/ribonuclease H/putative methyltransferase, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000092_03693715_03694890.mRNA True 4241 mRNA 0.44 3 3690550 3695228

Neighbor

gene id symbol gene type direction distance location
CI01000092_03551674_03573437 NA coding upstream 117058 3551674 ~ 3573492 (+)
CI01000092_03532136_03542761 SIRT2 coding upstream 147667 3532136 ~ 3542883 (+)
CI01000092_03478431_03479274 GJD1A coding upstream 210757 3478431 ~ 3479793 (+)
CI01000092_03433283_03442900 GLTSCR2 coding upstream 247590 3433283 ~ 3442960 (+)
CI01000092_03329908_03348045 NA coding upstream 342231 3329908 ~ 3348319 (+)
CI01000092_03725440_03728304 NA coding downstream 27815 3723043 ~ 3728325 (+)
CI01000092_03816152_03827312 AXL coding downstream 120924 3816152 ~ 3827361 (+)
CI01000092_03828205_03831437 NA coding downstream 132977 3828205 ~ 3831775 (+)
CI01000092_04205017_04213986 NA coding downstream 509789 4205017 ~ 4214128 (+)
CI01000092_04218446_04223477 NA coding downstream 523218 4218446 ~ 4224664 (+)
G305591 NA non-coding upstream 7927 3682257 ~ 3682623 (+)
G305589 NA non-coding upstream 11062 3677883 ~ 3679488 (+)
G305588 NA non-coding upstream 12779 3676769 ~ 3677771 (+)
G305590 NA non-coding upstream 16143 3671443 ~ 3674407 (+)
G305585 NA non-coding upstream 22327 3668007 ~ 3668223 (+)
G305599 NA non-coding downstream 38122 3733350 ~ 3750471 (+)
G305596 NA non-coding downstream 154253 3726347 ~ 3863135 (+)
G305655 NA non-coding downstream 170064 3865292 ~ 3865638 (+)
G305605 NA non-coding downstream 187461 3882689 ~ 3906909 (+)
G305662 NA non-coding downstream 211762 3906990 ~ 3907365 (+)
G305584 NA other upstream 22585 3667308 ~ 3667965 (+)
G304938 NA other upstream 1372316 2317792 ~ 2318234 (+)
G303768 NA other upstream 2374027 1315443 ~ 1316523 (+)

Expression


Co-expression Network