CI01000092_03725440_03728304


Basic Information

Item Value
gene id CI01000092_03725440_03728304
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000092
NCBI id null
chromosome length 5370156
location 3723043 ~ 3728325 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000092_03725440_03728304.mRNA
CTACATAAGCAACAGGGAAAAAGGGATCATCTTCATCTTATTGTCCCTCCAAGGTTCCGGGTTTTTTGTTCAATTTTGTTTAAAGATTCAGTTTGTAATAGTTTTAAGTTTTAGTTTAATAGTTTTGATAGATTGATAGATAGATAGATAGATAGAAGGATGTGAAAAATAAAACTAAGAAAATCAACAGATAATTGTTAGATTTTGGGTATTTTTTAGTGATTTGCTAATTTATTAGGCTAAATATTAAAATTAATATTAAAATTAAAATAAAGTAATGCATAATATCGTCAGCTCTTAAACACGTGATTTATTCTAAACAATGGCTGTGTCCGAAATCGCCCCCTATACCCTTAAATAGGGCACTATTTGAGGGGACAGCCATTTGTAGTGGTGTCCAAAACCATAGTAGACGATGTTGAGTGCACTCATTCAATCCCACAATGCACCGCAATAACGAGTGTACAACCGATGCACGCTCAACGGCTAGAGAATATCCATAATGCATTGTGAGAGTCGCGCGCTGAATGAATTCCCGCGTCTCGCCAGGAGATGGCGCCCGCAGCTGAATCAATCATCCATTCATTTTCCAAACCGCGCTGGTCCAGCATTATCATACAGGTATAAATTCCTTTTTTAATTAATCATTAAATCGTTTAAAAGGTTTGAACATGCTAGTTCAACATAAATATTCATTACTACTGGAGCTGCCTGTTTGCTACATTTTAAAAAGATTATTAAACAGTAGCAAAAACTATGCGAAATCGGCAGCCCTTCCGGTGCACTCAGTATCCGAATTCACTCAGTCGTTTCATTCACTCCTTCAAGTGGACTATATTAGTGGATTAATGTAGGGAATAGTGAATGAAGGTATAGGAGGCGATTTCGAACACAGCAAATGAGACTGTTGGAACTTTACATATCTCACGGCGTAGCCTGACGCATTGTGTGGTGGGCTGTAGCACTGTTAACCATGAAGTTCATTTCTCTCTGAGTTTTTTCTATTGTATCTAAGACACAACATATGGTGGCAAGGATGAAAGTCAGAATGGTGGAGTAGCTGTTTCCTGAATGCAAGTAAAAAGCAGGACGCCGACTAGGTGAGCTGAAGAAAGTCAATAGCTACCACCTGAAGTACTGACTGAAAGGAACGATGACTGCCATGGTGGGATCCGTGGCAGCATTTCATAAGTCACAATCATGGGAAGAGTATTGTTAAATATTGAACCATTTCTTCGTGGCAAATGATATTGAGGAACCAGAGAAAAACGAGCCATATTGTTGAGCTGTGTTGGAGCGCAGACATACACACACTGATGAGGAATTTATTGAGTCCTGAAAGACCAGGAGCAGAGTTATGAGGAACTGGTGAGTTTGCAGAAAATTCATTTTAATCTGAAGCCCAGTGAAATAGTGCAGAGGTGGAAATTTAATTCACGTAACAGACACCCTGATGAAAGCATAGTAGAATATGTGGCCGAACTGAGAAAGCTTGCACAAGATTGTCATTTTGGAGACACACTCACAGTTATGCTGAGAGACAGGTTAGTGTGTGGTGTTAATGATGACAGCATACAACGGAGATTATTGGCTGAGGATGGACTGACATTTGAGACTGCGCTAAGGAAAGCTCAGGCTATTGAAGCTGCTAATAAGGATATGGCTGATTTGCACAAAGATAAAGGAAATTGATTAGGTACCACTGTCTTTAAAGGGATAGTTCACACAAAAATGAAAATTTTATGTTTATCTGCTTACCCCCAGGGCATATAAGATGTAGGTGACTTTGTTTCTTCAGTAGAACACAAATTATGATTTTTAACTCCAACCGTTGCAGTCTGTCAGTCGTATAATGCATGTCAATGGTAACAAAATCTATGAGAGTAAAAAAAACATGCACAGACAAATCCAAATTAAACCGTCTCGTGACGACATATTGATGTCCTAAGACACAAAACGATCGGTTTGTGTGAGAAGCCGAACAGTATTTATATCATTTTTTACCTTTAATACACCACTATGTCCAACTGCCTTGAGCGCGCGCACGGCATCCGGTGCGTGAGGTGTGTACGCGCTCTGGCGTAGTTTACGCAAGCGCCAGAAGTGATCTCTCACGCGTATACGTCACTCATTGTTTACACAGTGCACAAACATTGTAGGTACGACGGCTAATCAAAATGGTACTTACTTGCGCTTATCTGGATTGTTCAAACCGACTTAAAACCAAAAGATTACGCTCTCTCGTGCGAACTCATTTGGGAGTGGTGACTTTCCACGTATTCCCAACTTCTGAGCCTGCTCACCTGAAGTTATGGTCGATTGCTCTTCGGCTGGATATCAACACACCCATTAACGTACTAAAGTTGTTGAGGGTCTGCAGCGATCATTTTTCCCCTGATGATTTTACATACCCAGGAGAGGATCACGTATGACTTAAACCATCAGCTGTGCCTATGGTTTTTCCACATCCAACTGAGGGACATTGTAGGTGGGGGGAAAGGGATGACTGAGTGCATAGGGCCCTGGCATGGTAATATCAACCCTGTGTTTATCGTGCTTGTAGAGGTACCTAATCCAGAGGAAGAAGGGGTAGTTGAGGTAGGAGATAGAAGTAGTAGGACCTGTGAAGAAGGTGTAGACACTACAAAAAATGATTCCTCAGAGGGCAGTGAGGCAGACAGTATTATGACAGTGGTAGAGGAAGGAAAAAGTGATGTTAGTGCTGAGTATGTAACTGATGATCCAGCATTATGGCCAGAGTCACAGCAGTTGACCAATCAGCAACGGAATTCTATAATTCTCAAACTGGCAAACACAAATCCTGAAGAAGCTGATTTGACCAAAATTGCTCCAAAAGATAAGACAGACAAACCTTTTCCAAATTATCTACAATATGCTTAAGCACCAAGTGGCTGTGAAAAA

Function

NR:

description
Zgc:165409 protein, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000092_03725440_03728304.mRNA True 2922 mRNA 0.41 3 3723043 3728325

Neighbor

gene id symbol gene type direction distance location
CI01000092_03693715_03694890 NA coding upstream 27815 3690550 ~ 3695228 (+)
CI01000092_03551674_03573437 NA coding upstream 149551 3551674 ~ 3573492 (+)
CI01000092_03532136_03542761 SIRT2 coding upstream 180160 3532136 ~ 3542883 (+)
CI01000092_03478431_03479274 GJD1A coding upstream 243250 3478431 ~ 3479793 (+)
CI01000092_03433283_03442900 GLTSCR2 coding upstream 280083 3433283 ~ 3442960 (+)
CI01000092_03816152_03827312 AXL coding downstream 87827 3816152 ~ 3827361 (+)
CI01000092_03828205_03831437 NA coding downstream 99880 3828205 ~ 3831775 (+)
CI01000092_04205017_04213986 NA coding downstream 476692 4205017 ~ 4214128 (+)
CI01000092_04218446_04223477 NA coding downstream 490121 4218446 ~ 4224664 (+)
CI01000092_04284298_04291859 NA coding downstream 555973 4284298 ~ 4291859 (+)
G305591 NA non-coding upstream 40420 3682257 ~ 3682623 (+)
G305589 NA non-coding upstream 43555 3677883 ~ 3679488 (+)
G305588 NA non-coding upstream 45272 3676769 ~ 3677771 (+)
G305590 NA non-coding upstream 48636 3671443 ~ 3674407 (+)
G305585 NA non-coding upstream 54820 3668007 ~ 3668223 (+)
G305599 NA non-coding downstream 5025 3733350 ~ 3750471 (+)
G305596 NA non-coding downstream 121156 3726347 ~ 3863135 (+)
G305655 NA non-coding downstream 136967 3865292 ~ 3865638 (+)
G305605 NA non-coding downstream 154364 3882689 ~ 3906909 (+)
G305662 NA non-coding downstream 178665 3906990 ~ 3907365 (+)
G305584 NA other upstream 55078 3667308 ~ 3667965 (+)
G304938 NA other upstream 1404809 2317792 ~ 2318234 (+)
G303768 NA other upstream 2406520 1315443 ~ 1316523 (+)

Expression


Co-expression Network