CI01000092_04205017_04213986


Basic Information

Item Value
gene id CI01000092_04205017_04213986
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000092
NCBI id null
chromosome length 5370156
location 4205017 ~ 4214128 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000092_04205017_04213986.mRNA
GAAAGAAAGTGGGTATGATGACAGAATATTGTTTTTCACCTGGCCCCAGCAGTGCATTGTGATTGAGCAGCACAATGACATCATTCACTCGGTCACTCACCTGTATCTCACCTACAAGCAGCAACTGAGGAAATGTGCTTATTTCAAAAAGCTTATTTCAGCCACTCATTCCTTCAGTTATTACCCAAAGCTCATGGCCTTTCACATGTTAAAGGAACTTATCAGTCCAATCATACAGAGGAGAAACACGAACTACCGGGATTGTATCTCCGTAGGGGAATGTCTGATGATTACACTACGGTTCTTGGCAACAGATAAGCAAGCCAAAGGAGAAAGCTTCAAGAGCCTTTCTTACCAGTTCCGATTGGGAATGTCTACAATTCAGCAATTCGTTCCTGAAACCTGTGCAGCAATCTACCAGGTCTTAAAAGAGAAATACCTGAAGTGCTTATGGCACTTTGACAGCAACTACAGATTTCTATATGTTGATGTGGGCTACAATGGGCATATTTCAGAAGTTGGAGTGTTTGGGAGATGCTCATTGCAGGATGCCTTGGATAAAAGAACATCCAACATACCTGCACCTGCACCACTTCCTGAATCTGACCAGCTGGCCCCTTACTGCATTGTGGCAGATGAGGTATTCCCCTTAAAGGAGTACCTCATGAAGCCATATCCGAACCGCAGGCTATCTGTAGAGCAACGCATATTCAATTACAGGCTTTCGCGAGCTCGGAGGGTGGTTAAAAATGCATTTGGCATCCTGGCAAATCGTTTTCGGCTCCTACTAACCACTATTAATATTCAAAACACTGCCAAAGTAGAAGACATTGTTTTGACTTGCTGTGCTCTGCACAATTTTCTGTGTACAGACGATCGCCATACCTCCGCCATCCATTTTAACTTGAGCGTTCTTCCCAATACACGGGCTTCACGAGTCAACTGCAGCAGGACCACGTCGGAACTGCTGTTTCTCTCTCGCATCGCGCGTTCTCGCTTCGTCCTCTCTCTCGCACAGCCCCGATCGGCACATATGCGAGTGTTATTTACCGATTTTAGCCCTGCTTTTAATACTGTTATCCCCAACATGCTTATTCTTAAACTTCATGATCTAGGACTCAGCTCAGTATTACGTAAATGGATCCAGAATTTTCTGCCAGAGCGCCCCCAGGTGGTGAGAATGGGTACACAACTGACTTCCACCATAACATTGAGCACTACCATGCCACCAGGATCTGTACGGAGTCCCATCCTTTATCCCCTCTTTACACATGACTGTGTTCCTGCATTTTCTGATAACATCATTGTAAAATTTGCAGACGACACAACAGTGATTGGTCTGATTTCTAACAATGATGAATTAGCCTACAGAGTGGAAGTACAGAACTTGGTAAGCTGGTGCTCCAAGATCAATTTGACCCTTAATACAGAGAAAATTAAGGCTAATCATCAACTTTGAGAGAGCACAGCAGTTGGAATATGCTCCAGTATTTACCAACGGGGACAGAGTGGAGAGGGTGTCCAGTTTCATGTTTTTGGGCATGTACTGTACATCTCAGAGGACATTTCTTGGTCTACAAATATTACTGCATTGGTTAGTA

Function

NR:

description
orf1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000092_04205017_04213986.mRNA True 1601 mRNA 0.44 9 4205017 4214128

Neighbor

gene id symbol gene type direction distance location
CI01000092_03828205_03831437 NA coding upstream 373242 3828205 ~ 3831775 (+)
CI01000092_03816152_03827312 AXL coding upstream 377656 3816152 ~ 3827361 (+)
CI01000092_03725440_03728304 NA coding upstream 476692 3723043 ~ 3728325 (+)
CI01000092_03693715_03694890 NA coding upstream 509789 3690550 ~ 3695228 (+)
CI01000092_03551674_03573437 NA coding upstream 631525 3551674 ~ 3573492 (+)
CI01000092_04218446_04223477 NA coding downstream 4318 4218446 ~ 4224664 (+)
CI01000092_04284298_04291859 NA coding downstream 70170 4284298 ~ 4291859 (+)
CI01000092_04335830_04347365 MED17 coding downstream 121702 4335830 ~ 4347554 (+)
CI01000092_04355642_04374319 NA coding downstream 140737 4354865 ~ 4374322 (+)
CI01000092_04392184_04393522 NA coding downstream 177706 4391834 ~ 4393942 (+)
G306173 NA non-coding upstream 43583 4161047 ~ 4161434 (+)
G306165 NA non-coding upstream 52247 4152491 ~ 4152770 (+)
G306154 NA non-coding upstream 66331 4138435 ~ 4138686 (+)
G305734 NA non-coding upstream 104290 4100470 ~ 4100727 (+)
G305704 NA non-coding upstream 113228 4091538 ~ 4091789 (+)
G306217 NA non-coding downstream 89659 4303787 ~ 4304138 (+)
G306205 NA non-coding downstream 92661 4306789 ~ 4313604 (+)
G306241 NA non-coding downstream 157451 4371579 ~ 4372133 (+)
G306238 NA non-coding downstream 174696 4388824 ~ 4425428 (+)
G306252 NA non-coding downstream 182319 4396447 ~ 4396893 (+)
G305596 NA other upstream 343684 3726347 ~ 3863135 (+)
G305584 NA other upstream 537052 3667308 ~ 3667965 (+)
G304938 NA other upstream 1886783 2317792 ~ 2318234 (+)
G303768 NA other upstream 2888494 1315443 ~ 1316523 (+)

Expression


Co-expression Network