CI01000092_04218446_04223477


Basic Information

Item Value
gene id CI01000092_04218446_04223477
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000092
NCBI id null
chromosome length 5370156
location 4218446 ~ 4224664 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000092_04218446_04223477.mRNA
GTGTGAAGATTATTGGTCATGATATAACAGTTGTGAAAGAAGGGAGTGCCACTTTGTTTTGTCACCTGACTGAGACAGAGGAGAATTTAACTCATATCACCTGGCAGAAACAGACAGGAGAAAACCCTGAACAGGAAACCTTCCTTATCCATAAAGATGGGAAAACTGAACTCAAAAATGATATACAGGACAAGGTCAAATTTACTGGGAACATTAAAGAGAAGAATGGATCGATTCAGCTGCTGGGAGTGTCGCTTCTGGATGATGGGATCTACACTTGCATCTTCAACACATTTCATAGTGGACAAATTCAGACAAACATCAATGTCACGGTACTTGTTCCTCCTGTGGGGAGCGTGACGGGGAGCACACACGTTTCTGATCATTACGAAGTTACTTTGGCATCATGTGAAGCCTCCAAAGCTCGGCCAGCAGCAGAAGTGTTGTGGAGATTAGGAGCTCTGAATGACTCCCTGAGAACTGAAACCAGCTGCACAGAGCACTCAGATGGGACATTTACCGTTGTGAATCACATACTTGGTGCACCACATAAACATTTAAACCAGAGGAAGATCCAGTGTGTGGTGAAGCACAGCACACTGACAAAGGAGCTTGAACTCGACTATATGATAAATGTCCACTACACATTTAGAGTTGAGTGGCAAAGAGTTACTGTCACAAGAGTGAATGGAAGTACTCCGCATTCTGAAGGCAATAAACTTTTCATCCCAAAATCCTCCTCTGATTTTAATGGTGTATACATCTGTACAGCATCGAACGAGTATGGAAGTGCATCAGGTGTCCTCTATGTGGGTAACACTGGATCCACTGATGTCTGTTGGGATCTCTTTGGTTTTATCGTCAACTGTGCCATCCTGGGGATTATTATGGTTTGCACAGTGCTCAGTGGTGTAGAAATGTCTCAAGTTCTGAGGTTCTACTGAGGTAAAAGTAGGGCACTACAAGGCTAAAGGTACACATCTAAAGAAAAATTTGCTTTTCATTACACCCATAATGTATGATTGCAGGAAAAAAATATATGTTTGTATTGAACATTTATGGAGCAACAGATTTTATGTGAAAATAAATCATAAAATTGGTTCATTTTGTTTAAAAATCTAATAAATGTATGAGGTGGCGAGGGAGGCTTTTACTCCACATACGGGCCAAAGGCACACAGTATTGATACAAATACTTTGGCTAAAATAATGTTTTTAATAATGACTAAGTTAATGCTTGTTCAAAACAGTCACTTTAGCAAAGTTTGTACTATTTTCTGTTGATTTTGATAAAAGAATTCATTTTTGTTCAATAAATATACTCATTAAAATGTTAACATAAAAAAAATTGAACAAAAAAACTGAAACAAAATTATTTTAAAAAGTAAAGATTCTGAAAGAATTGAAGATCCCATAATAATGTAATATAGATCTACAGTAGAAACTACTACAGTAGATTTACAATAAATTTTATTACATGATATGAGTATTATCAGATTTTTAAATATAATGGTTTCATTATAAATAGGGGCATTATCTCTTTTTTGATGTGTCTGTATCTGCCCATGATTCATTTCATGACTGTTTCAATGCTTGTGTGTGAATTATGTGCACATCTGTTTAATTTTTACCGTGTTATTCTTGTGTGTGTTTGAGTAACAATGACTTCTCTGTGTGTGCACATGTGAAAATTAGATCATTCTAATTCATATGGTGTGTTCATATCTTTCTGGGAAGTCCCATGGGTGTTCAAATCCCTTTGGTGAACCAGATGGCAATGTACCTTTTTATACCAAAAATCTCAGAGAAAACAATGGTATTGAACTGCACAAACAAGCCACAGCAGAAGTCAACACACACAAGAATGTGCTTTGGAAATTTGTACTTTTATTTAGAAGTATGCATTCAATTGGTCAAAAATGGCAGTAAAGACATTTGTAATCTTACAAAAGACCAAGTAAATTCTGTTCTTTAAACTACTTTATGCTGTATCACGGTTTCCACAATCATTAAGCTGCATAACAGTGATGATAATAAGAAATGTTTCTTGAGCACCAAATCAGCATATTACAATGAAGTAATAGCTGCTGGAAATGGATCTTACTTTTAGTTTTGACTGTAGTGTTGATCAA

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000092_04218446_04223477.mRNA True 2131 mRNA 0.36 5 4218446 4224664

Neighbor

gene id symbol gene type direction distance location
CI01000092_04205017_04213986 NA coding upstream 4318 4205017 ~ 4214128 (+)
CI01000092_03828205_03831437 NA coding upstream 386671 3828205 ~ 3831775 (+)
CI01000092_03816152_03827312 AXL coding upstream 391085 3816152 ~ 3827361 (+)
CI01000092_03725440_03728304 NA coding upstream 490121 3723043 ~ 3728325 (+)
CI01000092_03693715_03694890 NA coding upstream 523218 3690550 ~ 3695228 (+)
CI01000092_04284298_04291859 NA coding downstream 59634 4284298 ~ 4291859 (+)
CI01000092_04335830_04347365 MED17 coding downstream 111166 4335830 ~ 4347554 (+)
CI01000092_04355642_04374319 NA coding downstream 130201 4354865 ~ 4374322 (+)
CI01000092_04392184_04393522 NA coding downstream 167170 4391834 ~ 4393942 (+)
CI01000092_04458178_04481575 NA coding downstream 233514 4458178 ~ 4481575 (+)
G306200 NA non-coding upstream 6396 4211608 ~ 4212050 (+)
G306173 NA non-coding upstream 57012 4161047 ~ 4161434 (+)
G306165 NA non-coding upstream 65676 4152491 ~ 4152770 (+)
G306154 NA non-coding upstream 79760 4138435 ~ 4138686 (+)
G305734 NA non-coding upstream 117719 4100470 ~ 4100727 (+)
G306217 NA non-coding downstream 79123 4303787 ~ 4304138 (+)
G306205 NA non-coding downstream 82125 4306789 ~ 4313604 (+)
G306241 NA non-coding downstream 146915 4371579 ~ 4372133 (+)
G306238 NA non-coding downstream 164160 4388824 ~ 4425428 (+)
G306252 NA non-coding downstream 171783 4396447 ~ 4396893 (+)
G305596 NA other upstream 357113 3726347 ~ 3863135 (+)
G305584 NA other upstream 550481 3667308 ~ 3667965 (+)
G304938 NA other upstream 1900212 2317792 ~ 2318234 (+)
G303768 NA other upstream 2901923 1315443 ~ 1316523 (+)

Expression


Co-expression Network