CI01000092_04392184_04393522


Basic Information

Item Value
gene id CI01000092_04392184_04393522
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000092
NCBI id null
chromosome length 5370156
location 4391834 ~ 4393942 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000092_04392184_04393522.mRNA
GTATAAAAGCTGAGCTCTTTCTGGAACTTCACAAAATCTTCCACTGAGATTCTGAAGTCAACAACCAAACCAAGGTGAGTTTTTGGAAGAAAAACCGGTAACACTTTACAATAAGGTTCATTAGTTAACTACATCAGTTAACATGAACTAATAATGAACTGCACTTATACAGCTTTTATTAATCTTTGTTAATGTTAATTTCAGTGTTACTGAAAAAACAACTGAATAACATTTCTAAAGTATCTTCGTTGTTAGTCTTTAAAATACATTGAGAATCCACAGTGTGCAGCATGAGTGCAGACATTTAACTTTTCCTGTTTATTCATTTTGAGGTTCATTTCAGGTTCATCATGGCAATGTTGAGAAGTCTAATGCTTCTTTTCCTTATCTTCTCCATGGGGAATGCAGAAGTTGATTTAGTCATGAAATGCCCCGCTGGATGGTCAAATTTTGGACTCCGGTGCTTCAAATACTTCTCTCAGTCGGTTAACTGGATCACAGCACAGAGAAACTGCCAAAGTCTTGGTGCGAGTCTCGCATCTGTGCATAATAAACTAGAAAATGATTTTCTGCTGGGTCTGTTGCCTTCTTCTTCCACACGTGCTTGGATTGGTGCTCATGATGGAGAACAAGATGGACAGTGGTTGTGGACTGACGGAACTGTGTATGACTATACCAACTGGTGCGCTACAGAACCAAACAATAATGGTGGTGAAGAGAACTGTCTGGAGATCAACTGGACCTGTGAGAATGCAGTCTGATTTTTGAATACGGTTTCGAATTACAATTTACAATATATAATTTCATATCACACAGTAACATGTAATGGCTTATTTGTATTTCTAAAAGAGCCTTAGGTTAAACATTATTTTATTTTGATTCTAACACCACTATAATGATCAGAATAACTTATTTCATTTTCCACCCTACAGCTAACCGTTGCTGGAACGATGAGTCCTGTCCAAACCAAATGGGCTATATTTGTGTTACATACGTATGAGACCATATGCAGTCATGTTGCTCCACAGTTACTTTGATTGTACACTTTCTGATCTTATCTTTACCAAAAAATGTTAACATTAAACTTCATTTAAATCTTTTCTAAGCTTTAGTCTCTTCTTCTATACCTCTTCTTCAATTTAATCATCTTCAATACTTTCTCTGTAACACTCCTCTAACAA

Function

NR:

description
Si:dkey-241l7.4 protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000092_04392184_04393522.mRNA True 1181 mRNA 0.36 4 4391834 4393942

Neighbor

gene id symbol gene type direction distance location
CI01000092_04355642_04374319 NA coding upstream 17512 4354865 ~ 4374322 (+)
CI01000092_04335830_04347365 MED17 coding upstream 44280 4335830 ~ 4347554 (+)
CI01000092_04284298_04291859 NA coding upstream 99975 4284298 ~ 4291859 (+)
CI01000092_04218446_04223477 NA coding upstream 167170 4218446 ~ 4224664 (+)
CI01000092_04205017_04213986 NA coding upstream 177706 4205017 ~ 4214128 (+)
CI01000092_04458178_04481575 NA coding downstream 64236 4458178 ~ 4481575 (+)
CI01000092_04496416_04505871 NA coding downstream 102474 4496416 ~ 4505910 (+)
CI01000092_04517186_04519261 NA coding downstream 123244 4517186 ~ 4519585 (+)
CI01000092_04529365_04534495 NA coding downstream 135423 4529365 ~ 4534497 (+)
CI01000092_04551146_04603991 CUX1B, SH2B2 coding downstream 157204 4551146 ~ 4606126 (+)
G306241 NA non-coding upstream 19701 4371579 ~ 4372133 (+)
G306205 NA non-coding upstream 78230 4306789 ~ 4313604 (+)
G306217 NA non-coding upstream 87696 4303787 ~ 4304138 (+)
G306200 NA non-coding upstream 179784 4211608 ~ 4212050 (+)
G306173 NA non-coding upstream 230400 4161047 ~ 4161434 (+)
G306252 NA non-coding downstream 2505 4396447 ~ 4396893 (+)
G306317 NA non-coding downstream 109102 4503044 ~ 4550487 (+)
G306342 NA non-coding downstream 179514 4573456 ~ 4578385 (+)
G306275 NA non-coding downstream 208778 4602720 ~ 4603311 (+)
G305596 NA other upstream 530501 3726347 ~ 3863135 (+)
G305584 NA other upstream 723869 3667308 ~ 3667965 (+)
G304938 NA other upstream 2073600 2317792 ~ 2318234 (+)
G303768 NA other upstream 3075311 1315443 ~ 1316523 (+)

Expression


Co-expression Network