CI01000092_04496416_04505871


Basic Information

Item Value
gene id CI01000092_04496416_04505871
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000092
NCBI id null
chromosome length 5370156
location 4496416 ~ 4505910 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000092_04496416_04505871.mRNA
ATGTCCCGCGTGTGGACCGGCGGTCACTCCTCACCGTTGCTGTGTGCTGCAGTCTCCTGTGAATCCCAGCACATGGTGGCGACCGGAGCTGAAGGAGGTGAACTGACCCTGTGGAACCACGACGGCTCGCCGCTCTCCACGCTGCACGTGAGCATGGACGATGACGTCACGAGCCTGGCCTTCTCGCCGTCGGCACCCTGCGTGCTGTACGCCTCTCACGGATGCGCTGTTAGCGTGCTAGACTGCAGAAACCTGAAGACGGCGGTGGGTGAGCTGACAGACGTGGCTGAGGAGGAGATCAACTGTCTGTCTGTGAACGAGACTGGCCGTGAGCTCGCTGCGGCCGATGACTCCGGAGCCGTGACACTCATTGATCTACAGCAGGAGAAAGTCATCAGGACACTGCGCAAACACGACAACATCTGCTCGTCCGTGACCTTCCGACCTCGCAGGCCTCATAGTCTGGTGTCTGCAGGACTTGACATGCAGGTTTTGCTGTGGAACCTGCCGAAGCCGCGTCCGCTCTGGAGCTGCAGTCTGCAGGACACGCAGGAGGAAGATGCTCGTCAGATGTTCAACCCTCCTCTCGCACACTGCGTTGGTGTGGCGTCCTGCGGCAACGTGTTTGCCTGTGCGGCCGAGGACGGCTGCGTCCATCTGCTGCGGGTGTCTGAAGACGGCAGGCTCCGGGAGCGAGGGACGCTCCAGGCTCACAGTCAGGGAGCGTCGCAGTCTCACTTCATCAGCTTCCTCTCACACCCGTACTGGCTGGCCACCGGAGGGAACGATGGCCTCGTGGCTCTCTGGGACCTCAGTCAACATCCACTGGTGGAAAATGGCAGGAAGGCTAAAGGCCACAAAAAGAGAACTAAAGCCAGAGCCAAGAAACGTGACAAAAACCAGAAACAACAGGAAGAGGAGGCCGGCAGTGCTTGCTCTAGTTCAGAGACACATGGAAATATCGGGCCCAGACAGTGTTTTCAGCACGGAGAGAAGGTGAACTGGGTGTGTCCGGCTGTGCTGGAGGGAAAGCCCAGTCTTCTGGTGATGGATCAGAGTTCCTGCCCATCTGTGTATTTGTTGGATCAACTATAATATACATCTGAATTGGCCTGTAAAAATCCTTTACATGTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000092_04496416_04505871.mRNA True 1134 mRNA 0.58 2 4496416 4505910

Neighbor

gene id symbol gene type direction distance location
CI01000092_04458178_04481575 NA coding upstream 14841 4458178 ~ 4481575 (+)
CI01000092_04392184_04393522 NA coding upstream 102474 4391834 ~ 4393942 (+)
CI01000092_04355642_04374319 NA coding upstream 122094 4354865 ~ 4374322 (+)
CI01000092_04335830_04347365 MED17 coding upstream 148862 4335830 ~ 4347554 (+)
CI01000092_04284298_04291859 NA coding upstream 204557 4284298 ~ 4291859 (+)
CI01000092_04517186_04519261 NA coding downstream 11276 4517186 ~ 4519585 (+)
CI01000092_04529365_04534495 NA coding downstream 23455 4529365 ~ 4534497 (+)
CI01000092_04551146_04603991 CUX1B, SH2B2 coding downstream 45236 4551146 ~ 4606126 (+)
CI01000092_04614031_04615179 SNAPC3 coding downstream 107750 4613660 ~ 4615298 (+)
CI01000092_04619174_04622538 NA coding downstream 113129 4619039 ~ 4622856 (+)
G306238 NA non-coding upstream 70988 4388824 ~ 4425428 (+)
G306252 NA non-coding upstream 99523 4396447 ~ 4396893 (+)
G306241 NA non-coding upstream 124283 4371579 ~ 4372133 (+)
G306205 NA non-coding upstream 182812 4306789 ~ 4313604 (+)
G306217 NA non-coding upstream 192278 4303787 ~ 4304138 (+)
G306342 NA non-coding downstream 67546 4573456 ~ 4578385 (+)
G306275 NA non-coding downstream 96810 4602720 ~ 4603311 (+)
G306290 NA non-coding downstream 101667 4607577 ~ 4609397 (+)
G306279 NA non-coding downstream 105540 4611450 ~ 4613064 (+)
G305596 NA other upstream 635083 3726347 ~ 3863135 (+)
G305584 NA other upstream 828451 3667308 ~ 3667965 (+)
G304938 NA other upstream 2178182 2317792 ~ 2318234 (+)
G303768 NA other upstream 3179893 1315443 ~ 1316523 (+)

Expression


Co-expression Network