CI01000092_04529365_04534495


Basic Information

Item Value
gene id CI01000092_04529365_04534495
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000092
NCBI id null
chromosome length 5370156
location 4529365 ~ 4534497 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000092_04529365_04534495.mRNA
GTGTAAGCACAGAACAAAGAGAAGGCCATGAAAGAGAGAAGGACGAGGTGAAGAAGATCTGCACAGAAACACATGATTCAGTTCAGAGGGATGATGAAAAAGAAGGAGCAGGAGGAGCAGATCAACACCTACAGCAGGAAGAGAATGAAAGAGAACAAATAAAGCATCTATTTCACAGACTTCATCTTGATGGCAGGCGCCACAATAAACTGAGAGCTGCAGATGTTCTTCAGATAACTGAACATTCACTGTCCCATGAATCTTGTGCTGAAGAGGAGCTGGTTCACACTTTCCTACAAAAACTACTGATGATGGACTACAGAGCAAGATACATCAACGTTAAAGATACCAATGAACAGGATCAGATACAACAAAGAGATACTGTCTCATCTGAAAATGAAGATGATATTTTTGATTATGTTTCCTCTTTGTCAAACAAAGGAACAAGCCAATCGGACCATGTTCACCCGATGGATGTTCAGATGGCTGTGTTTCATTGTGCTGATGGTTCCCTGAAGCAGCTGATGGTCACTAAACTGTCCCAGTGTCAGTACGCTCTGCCTCTGCTTGTTCCTGATCCATTCACACAACAGATTGAGTTTCCTCTCTGGACATTCAGACAAATCAACAAGAGCTGGAAGATGAGAAACAACGACAATGAGATCATCAGTCAAACCCAGCCAATCTACAAGGCAGACACTCCAATGGTGTTTTTCTTCAGGTTTGGCTCTGTGTCCTCATCCAAGTCTCAGCTGATGAACAGTGTGATCAATGAGAAACACAACACGTTCTTCCACAGGAACTGCCCAGGCAGCAGCAGAACCAGAGTCCTGATGGATGGAGTGGTGGAGATCGCCTGGTTCTGCCCCTCTGGGAAAAACACAGATAAATTCACTGACTGTGTTGCGTTCTGTAATCTACACGGTGATGCAGGAGACCATGAGAAACAGCTGCAGATCCTCACTGAAATGGCCTCAGTCAATGTTGTTCTTCTGCCACGAATGGACAGAAATGACAGAAATGCCACTAAGATGCAAAACCTGTTTAAAATCAGAAAGCCACTTATTTGTCTTTTTACTGAGGATGAATCTTCTGTAATTGAGATGAAGAAAGAGAAATTCAAAATAGGTTTGAAAGACAGAAATCAGTCAGAAGTATCTGAAGAACTCAGAAGAAATATAAACAATTGTCTCTCAAAATCATCTTTGACTTTCAGACTTTCAGAAGATGTGTCCAAACACTTAGACATCAGAGTAGATGAGGAAGATGATGAAGACTGCAGGAGAGGAAGAGAAGCAGCACAGCAGATGATGAGTTTACTGGAGAAGAAAAATCTGACAGAAATCAAAGAATCATTTCTGCCTCATCAGGGGAAACTGTGGCATCAGTGGAGTCAGAAGAACAAAGAACTACACCGACCTCGAGCAGATGAGACAAAAATGGACATCAGTAGAAAACAAACAGAGATGAAGAAAATCCGCAAACAGCAGCATAAATATGACATCAGTGAGTTTATGAAGCTCTTTAATTATCATCTGTTCTCACAAACTGAAAATGAAAAGATGTTTTTCCTTAAATGGCTCCAAGTCTTCTTGGATGAATACACCTCAACTGACCTTTCTGCTCTACATCATAAGTATGATGAAAAGTGGTCAACAGTAGTAAAAGTGAAAAAGAACAACGGTAAACCTGAACAACTCAAAGCTGAACAAGCAGAACTTAAGAGAATAACTAAGGAACTTGAAGCTGCAACCTTTGGTTTGGAGCACATCATGAGGGAGGTTGGCCAAATCTATGAATCATGTTCATCTGTGCAGAGGAACAAGAAAGACCTGCAGTTTGACTTCTCTTCTCTCCCGAGTCTTGCAGCAGAGATGATGATCTCTGGATTTCCACTGGAGCTGATGGATGGAGATGCTGCTCATGTTCCTGTGATCTGGATCTCTGCTGTTCTAGATGAACTCATCCAGAAACTGGGAGACCAGAGAGTCTTTGTGCTGTCAGTTTTAGGGATCCAGAGCTCTGGGAAATCCACCATGCTGAATGCCATGTTTGGACTCCAGTTTGCCGTCAGTGCTGGCAGGTGCACCAGAGGAGCTTTCATGCAGCTGATCAGAGTATCAGATGAGATGAAAACACAGATGAACTTTGACTATATTCTGGTTGTTGATACGGAGGGTCTTCGTGCTCTAGAACTGGCTGGAAGGTCAACAAGACACCATGACAATGAACTGGCCACATTTGTTGAAGGACTTGGAAATCTAACCTTGATCAACATCTTTGGAGAAAACCCTTCTGAGATGCAGGACATTCTTCAAATTGTTGTTCAGGCCTTCCTGAGGATGAAGAAGGTCAGACTGAATCCCAGCTGTGTGTTTGTGCATCAGAATGTTTCAGACGTCACAGCTGGAGATAAAAACATGGAGGGAAGGAGACGACTGCAGGAGAAACTGGATGAGATGACAAAACTCGCTGCTAAAGAGGAAGTCTATGAAGCAGAATGTTTCAGTGATGTCATTGGATTTGATGTTGATAATGATGTGAAGTATTTCGCTCAGCTCTGGGAGGGCAGCCCACCAATGGCCCCACCAAACCCAAACTACTGTGACAATATTCAAGAACTAAAGGAATCTATTATGTCTCATGCCTCAAAATCACATGGAATGATGCTGACACATATAAAAGCTCGTGTTAAAGATCTATGGGAGGCTTTGCTGAATGAACGATTCGTCTTCAGCTTCAGAAATTCTCTGGAGATTTCAGCTTACAGGAAACTGCAGACTGAATACAGCAAGTGGTCCTGGAGCCTTCGCAGTGCCATGATGGAAACTGAGAACAAACTACACAACAAAATAGAGAATGAAGCAATTCACGAGGTTAAGGAAACTGATCTTCAAAGAGAACTGAAGACTACAAGTGAAGAAGTGAAAAAATCAATGTCTGAATTCTTTAAGAAAGACAGTGATAAAGATACACTGATTCAGTGGAAAACATCTTTTGAAATCAAAATCAAAGAGCTTCAGGAGAACATTGTGAAAGAAACAAATAGGAAATTAAATGAGATTCTTCAGCAGCGAGACCTGAAGAATAAGATTGATGCGCAGAGGAAACATCATGAAAACACTCTCTATGAAAAGAGCAAACAACTTGCCTTAAATCTCAAAGACAAAGCAAATGATGATGAAACACTGAAGAAAGAGTTTGATTTGTTCTGGGAACAGAGTGTGAAGAAGATCATCACAGACACTCCTGCAATCAGAGACATTGACATAATGAGAGATGTGAGGGAGATTCTCAGTGACGTCTATGAAAGTGTTCCTGTAGACCACTGGAAGAGCAGGGATATATTTACTGTGTCGAGTTATTTAGATTATGTACAGGTTAAAAAATCCAGTGGATTTATAGAAAAAGTTAAAGATTCTGTCAAAAAGGTATTTGGTCATGTATCTAAAGAGGAGGAGGAAGCTCAAATAAGTTTGTTAGTCACAGATGTTAAAGAGCAGACAGACACAATGATTCAGTCATTTAATATTTCAAAGATGGGCTACAACAAAAGCTTCATTCAACAGCTCATAGATTACATCAAAGCAAGAGTAACTGAACATCAGGATGGACGAGTGAAATATGTGTTCAAGAATGAATTCTTCATGGATTTGGTTCTTTCTGTCTGTAAGAGAGCAAACAAGATGATCACTGACCAACACAGACTGTTCAGAGAAGCAAATGATCCTGAAATATATGTTAAGAGAAAGAGAGAAGAGTACTATAGTATTTTCCAAAAATACTGTCATGGAGCAACATCAGCTGCTATTTATGGGGAGATCATCTGTCAGAAACTGAAAGAGCCCATTGAGCAGAGCGTCTACAAGAAGACTGCCAGAGAATTAGCAAATGAAATCAGATCAAACTGTCCATCACTGAATGAAAACAGATCAAATATGGAGAAGCACATCCTGAAGACACTGGCAGAAGAGGAAGATTTTGACAAATACATGAACTACATTAAAACTCCCAGAGATCACTTCAAGAGTTTCATCAGAGATGAAGTCAAGCGGTACATCACTGATAAGTTCAGTGTCAGTGTTTTACCCAAGATGAAGGAGAACATTGAACTCCTGCAGCAGAAGATCCTGGAAGCAGCACATGAATCCACTGAACATGTTCAAGAGAACAGAGGAGATGTTGGTTTGTGGTTGAAGAGTTTCACACGGCAGATTTCAGATGACCTGATCTTCTCTGTAAAAGACCTCAGTGGAGTGAAACATGATGATGTTGATGATTTCAACCTCCTAGAAGATGTGATAAGACAAGAACTTACTGATATAATGTCTGCCATCAGATGTGGATTCAAAATAAAGACATTTGCAGTAAAACTGCACAATAATTTCAGGCCAGATGAGTATCTGATTGATCACTTCTGTCAGTGCTGTTGGGTTCGGTGTCCGTTCTGTGGAGCCATCTGCACCAACACCATAGAAAACCATGATGAAGATCACAATGTTCCTTTCCACAGAGTGGATGGAATTAAAGGATGGAAGTACTATAAAACAGGGAATCTCAGTGCAGATTTTTGCACAACTTTAGTGACAAGTAATACATTTTTTTGTGTGTCAGGTGAGTGGTTTCCATGCAATGATTACAGAAGAGCAGGAGGAGTTTATGCAGATTGGAGCATCACCCCTGACCTCTCTGAGCTGCCCTACTGGAAGTGGTTTGTGTGCAGATTCCAGAAAGATCTGGAAATGCATTATAATAAAACATTCCAGGGTGATGGTGAGATTCCAGATGATTGGAGAAAGCACAGAAAAGAAGATGCTATTCAGAGTTTGGAACACTTTTAATA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000092_04529365_04534495.mRNA True 4843 mRNA 0.41 2 4529365 4534497

Neighbor

gene id symbol gene type direction distance location
CI01000092_04517186_04519261 NA coding upstream 9780 4517186 ~ 4519585 (+)
CI01000092_04496416_04505871 NA coding upstream 23455 4496416 ~ 4505910 (+)
CI01000092_04458178_04481575 NA coding upstream 47790 4458178 ~ 4481575 (+)
CI01000092_04392184_04393522 NA coding upstream 135423 4391834 ~ 4393942 (+)
CI01000092_04355642_04374319 NA coding upstream 155043 4354865 ~ 4374322 (+)
CI01000092_04551146_04603991 CUX1B, SH2B2 coding downstream 16649 4551146 ~ 4606126 (+)
CI01000092_04614031_04615179 SNAPC3 coding downstream 79163 4613660 ~ 4615298 (+)
CI01000092_04619174_04622538 NA coding downstream 84542 4619039 ~ 4622856 (+)
CI01000092_04648022_04657635 NA coding downstream 113525 4648022 ~ 4657666 (+)
CI01000092_04674418_04684486 RABGEF1L coding downstream 139881 4674378 ~ 4684854 (+)
G306238 NA non-coding upstream 103937 4388824 ~ 4425428 (+)
G306252 NA non-coding upstream 132472 4396447 ~ 4396893 (+)
G306241 NA non-coding upstream 157232 4371579 ~ 4372133 (+)
G306205 NA non-coding upstream 215761 4306789 ~ 4313604 (+)
G306217 NA non-coding upstream 225227 4303787 ~ 4304138 (+)
G306342 NA non-coding downstream 38959 4573456 ~ 4578385 (+)
G306275 NA non-coding downstream 68223 4602720 ~ 4603311 (+)
G306290 NA non-coding downstream 73080 4607577 ~ 4609397 (+)
G306279 NA non-coding downstream 76953 4611450 ~ 4613064 (+)
G305596 NA other upstream 668032 3726347 ~ 3863135 (+)
G305584 NA other upstream 861400 3667308 ~ 3667965 (+)
G304938 NA other upstream 2211131 2317792 ~ 2318234 (+)
G303768 NA other upstream 3212842 1315443 ~ 1316523 (+)

Expression


Co-expression Network