XLOC_010920 (CT025588.1)


Basic Information

Item Value
gene id XLOC_010920
gene name CT025588.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 40036711 ~ 40037796 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00021364
atttacaaaaataaatgctgtttagatttgtttatatatatatatatatatatatatatatatatattggctttAAAAAAAAGGGTAAACGTATTACACAATGGTGGTAGAAACAAAACGGCTGCATAGAATTGacataatttgtatcatatatattttatatctaaatagaaataataattttctcaaatatatgcatgcatttgtgtatttatatataataaataaacacagtacacacatatatattatgtcaaaacaaacttttattttggattaatCCCGAttcatttttgcccagcactaagaaaaaatcatgaaaatagtatatatatataatttatttaattta

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000095642

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00021364 True 352 processed_transcript 0.20 2 40036711 40037796

Neighbor

gene id symbol gene type direction distance location
XLOC_010918 rbms3 coding downstream 136046 39643268 ~ 39900665 (-)
XLOC_010919 CR626944.1 coding downstream 151460 39885134 ~ 39885251 (-)
XLOC_010917 NA coding downstream 411349 39612894 ~ 39625362 (-)
XLOC_010916 tgfbr2b coding downstream 431050 39505163 ~ 39605661 (-)
XLOC_010915 stt3b coding downstream 558965 39385483 ~ 39477746 (-)
XLOC_010921 si:dkey-29b11.3 coding upstream 3017 40040813 ~ 40043322 (-)
XLOC_010922 BX470182.3 coding upstream 100237 40138033 ~ 40155424 (-)
XLOC_010923 NA coding upstream 298685 40336481 ~ 40340518 (-)
XLOC_010924 si:dkey-242e21.3 coding upstream 316020 40353816 ~ 40373836 (-)
XLOC_010925 plekhf2 coding upstream 388077 40425873 ~ 40459104 (-)
XLOC_010626 CR392024.2 misc downstream 19141536 20895112 ~ 20895175 (-)
XLOC_010909 BX296552.2 non-coding downstream 926780 39029883 ~ 39109931 (-)
XLOC_010908 NA non-coding downstream 1011714 39000013 ~ 39024997 (-)
XLOC_010907 NA non-coding downstream 1086564 38948644 ~ 38950147 (-)
XLOC_010927 BX324007.2 non-coding upstream 483942 40521738 ~ 40584050 (-)
XLOC_010929 BX324007.1 non-coding upstream 644132 40681928 ~ 40682703 (-)
XLOC_010930 NA non-coding upstream 912072 40949868 ~ 40957633 (-)
XLOC_010933 NA non-coding upstream 1005198 41042994 ~ 41049894 (-)

Expression


Co-expression Network