G303542


Basic Information

Item Value
gene id G303542
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000092
NCBI id null
chromosome length 5370156
location 576684 ~ 577452 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU344879
CTAAGATGTAACAGAAAATCTAAAAATAAAATATAATTAAAAATATTAACAAACAATATAATAGTACATCAATGATACTAATATAACATTCTGTATCTACCAAAAGTAAACTCTATGGGGACTCGCAGTCAGTTGCAAAAAAAACAAAACAAAAAAACACTAATGTTAAAAAAAGCCCTTAGATAATACTCATACAATTATAACTTATTTTAAGTAACAAAACCCATCTGCTTATAATATAAGGACCTCATCAATTTTCTTTAGCTGGACTATGTTGGTCTGTGTTGATTGTGGGTTTGGACGGGTTGGGGTGGGGTTAGTCTAGCTCTGAATCCAGCGGTCTATCCACAGCCATGATGTCATCACATTACAGAGTCCAACACCTCAGCATCGACCCCGCTTAGATAATGTCTCATGGTGTGACACTTAAGAGCATGCAAGGTTAAGTTGGCCTGCAGGGACAAACTTAATATGCTAACTACATATATATAATTTCTTTAAACCCAAACTAGTGTTGTACAGTGGCCCCACAAAAAAATATGTTGACATTTAAAGGGATAGTTCACTCAAAAATGAAAATTTGCTGTTAATTTACTCACCCTCAGGCCATCTAAGATATAGATGCCTTTTTTCTTCAGTAGAACATTAAAGACAACTTTTAACTTTTAAACCGTGGTCCTTGGTGATTCATATATATATATGCAGGTCAACGGCTGCCATCATTTTGAAAGTCAAAACAACATATACAGGCAAAACACAATTAATACCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU344879 True 769 lncRNA 0.34 1 576684 577452

Neighbor

gene id symbol gene type direction distance location
CI01000092_00566301_00571771 NA coding upstream 4072 566165 ~ 573256 (+)
CI01000092_00433410_00477493 FOXO1, FOXO1A coding upstream 99178 432638 ~ 477506 (+)
CI01000092_00360538_00401759 NA coding upstream 174479 359535 ~ 402205 (+)
CI01000092_00290289_00332484 RCBTB2 coding upstream 244200 290289 ~ 332484 (+)
CI01000092_00234633_00236121 NA coding upstream 340458 234193 ~ 236226 (+)
CI01000092_00658637_00661404 LHFP, LHFPL1 coding downstream 81185 658637 ~ 661404 (+)
CI01000092_00759626_00765910 LHFP coding downstream 182174 759626 ~ 766379 (+)
CI01000092_00779993_00785442 NA coding downstream 202480 779932 ~ 785442 (+)
CI01000092_00868568_00868858 NA coding downstream 290578 868030 ~ 869072 (+)
CI01000092_00869289_00871464 NA coding downstream 291722 869174 ~ 871841 (+)
G303537 NA non-coding upstream 10577 565636 ~ 566107 (+)
G303536 NA non-coding upstream 12783 563553 ~ 563901 (+)
G303533 NA non-coding upstream 19766 556525 ~ 556918 (+)
G303532 NA non-coding upstream 20409 556067 ~ 556275 (+)
G303496 NA non-coding downstream 50299 627751 ~ 648620 (+)
G303618 NA non-coding downstream 277700 855152 ~ 855448 (+)
G303620 NA non-coding downstream 279624 857076 ~ 857313 (+)
G303621 NA non-coding downstream 280784 858236 ~ 863315 (+)
CI01000092_00887219_00908525 NA non-coding downstream 312334 887219 ~ 908525 (+)
G303768 NA other downstream 737991 1315443 ~ 1316523 (+)
G304938 NA other downstream 1740340 2317792 ~ 2318234 (+)
G305584 NA other downstream 3089856 3667308 ~ 3667965 (+)
G305596 NA other downstream 3148895 3726347 ~ 3863135 (+)

Expression


Co-expression Network