G303960


Basic Information

Item Value
gene id G303960
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000092
NCBI id null
chromosome length 5370156
location 1610158 ~ 1610843 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU345359
GGATTTTAAAATATGTTCTCAGAACTGTATACTGATTATTTATGGACAGGATATGGAGTCAGTTACAGCATTTTTCGGCTACGAGTGAAACGCAGGCGGTGGTCTGAAGTTAGCAGTTCCCCCGCCAAACACAAGCCATTCTCTGGCACGAGATCCAGCGCTGTTACGGTGGAAATGGGACAATAGAGACTGGTCTATTTACGCTTGAATTTAGGGCTGTAGCTAACGATTATTTTGGTAATCGAGTAATCGTTCGATTATTCTAACGATTCCTCGAGTAATTGCGCCAGACCCCCCTTCCCCCTCTAGGCGCAGGCGCGTGCTCTGAGCCAGAGACAGATGCACTCAGTGCTTGGCATATCACAACTATTCAGTGTTTCAATCACATGATGTTTATTTTAGGTTTCAGATATTTAAATACACAAGTACTAGTAACAATACATTTAGAGTTTGTAAAATATACACTGATGTCTATGGAAGCTGCAATAATAATCCTTTCCATTACAATTAGACAACTTGTTATATTCATATCAGATACATATTACATACTGTGAGTAAGGCAAGCAACTATAAAGTTTATCCTGTTCCTCTCCCAATTCACCGGACACTTACATCCATCCGTGTATTTCGAAAGAAGTGGAAAAATTCAAGTCTAAATCCGACAGATCTATTCTCCTGACCGCAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU345359 True 686 lncRNA 0.41 1 1610158 1610843

Neighbor

gene id symbol gene type direction distance location
CI01000092_01163367_01169844 NA coding upstream 439389 1163308 ~ 1170769 (+)
CI01000092_01050305_01051867 NA coding upstream 557698 1050305 ~ 1052460 (+)
CI01000092_01034513_01049419 MAML2 coding upstream 560739 1034513 ~ 1049419 (+)
CI01000092_00964013_00967452 NA coding upstream 642683 963887 ~ 980369 (+)
CI01000092_00887219_00908525 NA coding upstream 701633 887219 ~ 908525 (+)
CI01000092_01625114_01626286 NA coding downstream 13764 1624607 ~ 1626717 (+)
CI01000092_01871020_01880095 NA coding downstream 260177 1871020 ~ 1882078 (+)
CI01000092_01889654_01894899 NA coding downstream 278811 1889654 ~ 1895088 (+)
CI01000092_01912280_01944807 ABCG1 coding downstream 301437 1912280 ~ 1945217 (+)
CI01000092_01962495_01963651 NA coding downstream 351652 1962495 ~ 1963887 (+)
G303952 NA non-coding upstream 22397 1587286 ~ 1587761 (+)
G303864 NA non-coding upstream 24202 1575097 ~ 1585956 (+)
G303863 NA non-coding upstream 47620 1558146 ~ 1562538 (+)
G303930 NA non-coding upstream 54284 1555674 ~ 1555874 (+)
G303860 NA non-coding upstream 124239 1458466 ~ 1485919 (+)
G303970 NA non-coding downstream 10497 1621340 ~ 1621582 (+)
G303972 NA non-coding downstream 11894 1622737 ~ 1623401 (+)
G304551 NA non-coding downstream 98035 1708878 ~ 1709092 (+)
G304583 NA non-coding downstream 127107 1737950 ~ 1738317 (+)
G304650 NA non-coding downstream 232363 1843206 ~ 1843628 (+)
G303768 NA other upstream 293635 1315443 ~ 1316523 (+)
G304938 NA other downstream 706949 2317792 ~ 2318234 (+)
G305584 NA other downstream 2056465 3667308 ~ 3667965 (+)
G305596 NA other downstream 2115504 3726347 ~ 3863135 (+)

Expression


Co-expression Network