Item | Value |
---|---|
gene id | G304938 |
gene name | NA |
gene type | unknown |
species | grasscarp (Ctenopharyngodon idella) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | CI01000092 |
NCBI id | null |
chromosome length | 5370156 |
location | 2317792 ~ 2318234 (+) |
genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
id | name | namespace |
---|---|---|
GO:0016071 | mRNA metabolic process | biological_process |
GO:0000375 | RNA splicing, via transesterification reactions | biological_process |
GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | biological_process |
GO:0006397 | mRNA processing | biological_process |
GO:0000398 | mRNA splicing, via spliceosome | biological_process |
GO:0016607 | nuclear speck | cellular_component |
GO:0005681 | spliceosomal complex | cellular_component |
GO:0005685 | U1 snRNP | cellular_component |
id | description |
---|---|
ko03040 | Spliceosome |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU346472 | True | 443 | TUCP | 0.33 | 1 | 2317792 | 2318234 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
CI01000092_02279826_02285934 | NA | coding | upstream | 31713 | 2276512 ~ 2286079 (+) |
CI01000092_02186791_02187942 | NA | coding | upstream | 129850 | 2186791 ~ 2187942 (+) |
CI01000092_01989763_02003920 | PGM2L1 | coding | upstream | 313662 | 1989763 ~ 2004130 (+) |
CI01000092_01985290_01986640 | NA | coding | upstream | 331105 | 1985290 ~ 1986687 (+) |
CI01000092_01962495_01963651 | NA | coding | upstream | 353905 | 1962495 ~ 1963887 (+) |
CI01000092_02358901_02363225 | NA | coding | downstream | 39669 | 2357903 ~ 2364462 (+) |
CI01000092_02395791_02407508 | NA | coding | downstream | 77367 | 2395601 ~ 2407642 (+) |
CI01000092_02411552_02412283 | NA | coding | downstream | 93318 | 2411552 ~ 2413511 (+) |
CI01000092_02418597_02419541 | NA | coding | downstream | 100174 | 2418408 ~ 2419996 (+) |
CI01000092_02470059_02471839 | OR112-1 | coding | downstream | 151118 | 2469352 ~ 2471951 (+) |
G304934 | NA | non-coding | upstream | 6151 | 2311399 ~ 2311641 (+) |
G304930 | NA | non-coding | upstream | 17273 | 2300294 ~ 2300519 (+) |
G304907 | NA | non-coding | upstream | 59105 | 2258273 ~ 2258687 (+) |
G304906 | NA | non-coding | upstream | 60142 | 2257366 ~ 2257650 (+) |
G304901 | NA | non-coding | upstream | 73515 | 2244072 ~ 2244277 (+) |
G304955 | NA | non-coding | downstream | 32486 | 2350720 ~ 2350923 (+) |
G304963 | NA | non-coding | downstream | 63024 | 2381258 ~ 2381543 (+) |
G304966 | NA | non-coding | downstream | 75896 | 2394130 ~ 2394368 (+) |
G304967 | NA | non-coding | downstream | 77676 | 2395910 ~ 2396126 (+) |
G304968 | NA | non-coding | downstream | 83961 | 2402195 ~ 2402505 (+) |
G303768 | NA | other | upstream | 1001269 | 1315443 ~ 1316523 (+) |
G305584 | NA | other | downstream | 1349074 | 3667308 ~ 3667965 (+) |
G305596 | NA | other | downstream | 1408113 | 3726347 ~ 3863135 (+) |