G304972


Basic Information

Item Value
gene id G304972
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000092
NCBI id null
chromosome length 5370156
location 2408206 ~ 2408820 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU346509
TGGACAAATGATAATATAAATCACATATGTACTCTTGCAAGTTAACGATTGTTTGATATTATATGTTTTTTGTGTACAAGGATGTACAAATGATTGACATTTGACATATTTTGTGCAAGAAGTACACCTGTAGCATGGAAAATTACCCTGGGCATCAACTAGGCTTATCCCTCAGACTAGAACTCCTAGAAGAAACAAAGAGTGGTGGATCATTAAATACATTCAATAACTGAGGATCACTTTGAATGACGTGCCAGTGACTCTTAATAATCCTACTAATATCATTACTCAATGGACTAAATGTGGATTTAAAAACGCATGAATAGCTTTTCTTGCTTTTAATTGCGCACAAGTTACTTTCTTCCCGTTCTTGTAAACTGCGCACCTTCTCAAGTGCAGTATCAAGCCACTTATTGGGATATCCACGTGATTTAAAATCTGTATATAGATTCTGGGCTTTAACATCAAAATCCTCCTTCCTAGAGCAGATATGATGAAGTCTTAAAAATTGACTATAGGGTAACCCACGTTTTAAAGGAGTTGGATGGGCACTAGTAGCATGAAGGAGACTGTTCTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU346509 True 577 lncRNA 0.36 2 2408206 2408820

Neighbor

gene id symbol gene type direction distance location
CI01000092_02395791_02407508 NA coding upstream 695 2395601 ~ 2407642 (+)
CI01000092_02358901_02363225 NA coding upstream 43744 2357903 ~ 2364462 (+)
CI01000092_02279826_02285934 NA coding upstream 122127 2276512 ~ 2286079 (+)
CI01000092_02186791_02187942 NA coding upstream 220264 2186791 ~ 2187942 (+)
CI01000092_01989763_02003920 PGM2L1 coding upstream 404076 1989763 ~ 2004130 (+)
CI01000092_02411552_02412283 NA coding downstream 2732 2411552 ~ 2413511 (+)
CI01000092_02418597_02419541 NA coding downstream 9588 2418408 ~ 2419996 (+)
CI01000092_02470059_02471839 OR112-1 coding downstream 60532 2469352 ~ 2471951 (+)
CI01000092_02661524_02662121 NA coding downstream 252563 2661383 ~ 2662183 (+)
CI01000092_02721458_02724152 NA coding downstream 312573 2721393 ~ 2724152 (+)
G304969 NA non-coding upstream 2644 2405138 ~ 2405562 (+)
G304968 NA non-coding upstream 5701 2402195 ~ 2402505 (+)
G304967 NA non-coding upstream 12080 2395910 ~ 2396126 (+)
G304966 NA non-coding upstream 13838 2394130 ~ 2394368 (+)
G304973 NA non-coding downstream 476 2409296 ~ 2409733 (+)
G304980 NA non-coding downstream 32157 2440977 ~ 2441268 (+)
G304984 NA non-coding downstream 39566 2448386 ~ 2448653 (+)
G304987 NA non-coding downstream 53041 2461861 ~ 2462108 (+)
G304938 NA other upstream 89972 2317792 ~ 2318234 (+)
G303768 NA other upstream 1091683 1315443 ~ 1316523 (+)
G305584 NA other downstream 1258488 3667308 ~ 3667965 (+)
G305596 NA other downstream 1317527 3726347 ~ 3863135 (+)

Expression


Co-expression Network