G305164


Basic Information

Item Value
gene id G305164
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000092
NCBI id null
chromosome length 5370156
location 2846866 ~ 2849443 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU346754
ATCTGCTAAGAGCCTCTTGCTAACCAAACGCTAAATCCAGTAAATGTAATTTCAGGTTTAGTTTAAAATAACCTAGAGAAGGAGCCAGTCTAAGATGTAGAGGTAGATTATTCCAGCGCTTTGGAGCTGCCACTGCAAATGCCCGGTCACCACTCAATTTCAGTCACTCAATTTCGGTCCCTGGAATGTCTAGGATCATCTGATTTGTCAATCTCATGTTAATCTTGAGTACCTATATAGTAGTATAGCAGTCTTTAGTTTTATCAGATTTATAAAAGATACTCTGTACCGAGTCTTTTTGAAAACAGCTGAGCTCCTGGAGGAGTGATGTGGGCAAAGCTAAAGAGTGACGAGTGCACGCAGCTTTTGTGTAGCAATTGTCTGCAAGCTATCAGTTGTCAGCTAAACAGGGATCTTTACTGCTGTGACCACTCCATCTTTCAGTTTCAAATGATCTGTAAATCCAGCGTTGAACTGGACCTTGTTTATAAAACAAAAATCCTGAGGGCTCGAGCAGCCACGGGAAAACACAAGATATTCTCCATTCATTTTAACCAATAAAAAATTGATTGCAACTTTCAGATACGAATTTATCCTTATTTTGATAGTTAATTTAAGGCGGTTCTATGGTTATTTTAATGACAAATATCGAGAGCGCATCAATGTAATGCGTGAGCACAAATCTCTCAGCTCCACTTAACGCTGATTCTTCAGGAAGCAAGGTTATCTTTCCCTCACAACCAAAAACACACTTCTTTGATGACATTGTTGATTTCATGGTCTAAAAACAAAGTGATAAATCTTTCTCGAGCAAGTCTGTAAAGCCAAACGAAGCACGTTGATGGGCGTGCTCTTGTTCGCCCGCTCTGGTCGATGTGTGCGCGCGCTCTTCCTGAAGAAGTTTCTGTACAAGGAATTCCACCCTTTATTATGTAATACAGGGCCATACTCTAAAAAAACTTTCCGAAACATGTAGGAAATCTGAAGGAGTGTATTTGGCACAGAAATACTCCATCATACATCCAACTCGTTTTTTGAAACTTTGGCCATGTTTAGCATGAGAATGCAACTCTTTAACAGTGTAAATAAGTCAGAATACATGAAATAGCATTAGACCCCCCCTTGCAGAAATAACACGAAAGAGAAGCGCACACACAGAATGCCATATCGCAGACAGCGCACAAATAGACCACTGAATTGAGTCTTCTTTTACTTATTTTTGTGCGTCAATAGATAAAGGTCTATGATTTTGCATAAAAGGACTTCATCTTGCTAGAGTTTATTGCTATTTCTAAATCATGTTGCTTTCTACTGGGTGTCTGTTAGGTCACAACACTGCAGTAGAGAGCACTATGAATTGTTCTTCACGCACTCAGTAACTGTTAAGGGAAAGCGCAGTGCACGCTGTGTGCTGTGTGAATGTTGCTTCAAGTGCATCATTCAATATCAACCCTGGCAAAATGTGGTGGGATATGGGATGCAAATTACGCTTGTCACATGACTACTCATCTACAAGAACTCTGCGTTCAGTCAAAGACTATAGAATAACACAAGACGCGTCACTCGTATTATTTTGAATGGGAGAAAGTGCAACGTGCAATATGTCGGAATAAGTCCCACCTTCTAAATAAGAGCCAATCGCCGATTATTAAAGTCATCGCGTCACTGCAGTGGCTGTTAGAAGCTCCGGTTCCTATAGAAACAGTCAGACGCGCGCCTCCGAAACGAGGCACAAGAGACGCGCATTTAGGACTGCGCATGCGCATTAGCTTGATCCAGCCTGAAAAATACAATTTTTTTGTCATGATTCGAGCGTTTAGAAACAAATTATGAGACAGTTGTTGTCAGATTTCATTGGTGATTTCAAATATGAAATTTAATCGAAAGCTTGGCAAACAGCTTTGGAGAATTTGATGTTTCCCCATTCAAAGAGATAGGAGCTGCACTTGAATTCCCGAGAGGCGTTTCAAAGATGGCCGCCGAGTGAAATGACTTGTCTTAAAGGGACTCAGTCGCTTGTAAAGTGTTCCATATGTCGTCGTCAATTTCTAGATCCTCTGATGCACTTTTTGCCACTAGCAGATCCTTTATGTCATCTAATTCAGATAACAGAGCATCACCAAACAAAACATTCCCTTCTACTTCATCTGCAAAAGAAAGCAGTGCGTTTTTAACTTGATCCAGTCCCCAGTCTATAATCAAGTCCTACAGCCATATTCATTTCCAGCCTTTCAGTTCACCTTGCCAGACTTAAGGGTGCAATATGTAAGAATTTTGCAGTAAAATATCCAAAAACCACTAGGCCAGTGTTATATATTTTGTTCACTTGAGTACTAACAATATCCCAAATGTTTCCTACTATTTGTAAATCTTGAGAAAACTGCAATTTTAACCAAGGCTCTGGGACGTGTGAGGAGTCGCCTGTCAGTTGCGTCATACCCGCGTTATCCTCAGTTTCCGGTTTTATTTTGTAGAAACCATGGAAACACCAAAGACGCTTTAATATAGTACATGTTTTAATAGACAAGGGAACAACTGTTTTGATATATTTATAGACAGAAAACTAATTGTTGTTATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU346754 True 2578 lncRNA 0.40 1 2846866 2849443

Neighbor

gene id symbol gene type direction distance location
CI01000092_02818349_02838255 NA coding upstream 8611 2817620 ~ 2838255 (+)
CI01000092_02739990_02745224 NA coding upstream 101619 2739990 ~ 2745247 (+)
CI01000092_02721458_02724152 NA coding upstream 122714 2721393 ~ 2724152 (+)
CI01000092_02661524_02662121 NA coding upstream 184693 2661383 ~ 2662183 (+)
CI01000092_02470059_02471839 OR112-1 coding upstream 374915 2469352 ~ 2471951 (+)
CI01000092_02958119_02966042 WRB coding downstream 108581 2958024 ~ 2966463 (+)
CI01000092_02977237_02979350 SH3BGR coding downstream 127794 2977237 ~ 2979378 (+)
CI01000092_03007267_03029327 NA coding downstream 157824 3007267 ~ 3029327 (+)
CI01000092_03080030_03082866 PCP4 coding downstream 230119 3079562 ~ 3083624 (+)
CI01000092_03329908_03348045 NA coding downstream 480465 3329908 ~ 3348319 (+)
G305244 NA non-coding upstream 7537 2839062 ~ 2839329 (+)
G305230 NA non-coding upstream 23359 2823279 ~ 2823507 (+)
G305220 NA non-coding upstream 47986 2798634 ~ 2798880 (+)
G305219 NA non-coding upstream 49926 2796686 ~ 2796940 (+)
G305206 NA non-coding upstream 60659 2773011 ~ 2786207 (+)
G305143 NA non-coding downstream 21815 2871258 ~ 2876023 (+)
G305262 NA non-coding downstream 27989 2877432 ~ 2877839 (+)
G305148 NA non-coding downstream 28829 2878272 ~ 2883232 (+)
G305265 NA non-coding downstream 51247 2900690 ~ 2900968 (+)
G305270 NA non-coding downstream 64636 2914079 ~ 2914380 (+)
G304938 NA other upstream 528632 2317792 ~ 2318234 (+)
G303768 NA other upstream 1530343 1315443 ~ 1316523 (+)
G305584 NA other downstream 817865 3667308 ~ 3667965 (+)
G305596 NA other downstream 876904 3726347 ~ 3863135 (+)

Expression


Co-expression Network