G305148


Basic Information

Item Value
gene id G305148
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000092
NCBI id null
chromosome length 5370156
location 2878272 ~ 2883232 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU346736
GAGGGGTTGAACTGCTGTAAAACATTTTAAAACATGAGTCACAATTGTTCCCTTGCGAAAGCAAATCACAACGAAGACCCATTATCACTTTTTATTTTACAATCAGAAAAAAAAAAAAAAAAAAAATGCAATCTTCTTTACAGGGTTACATTTCTAAAAGTGAGGTGCTGAGCACAGAGCTAACAGTCGATCATAGTAAGCAATAAAAAAAAAAAGAACAAAAACGGTAACAAAACCAAAATACTGGTACAAAAGCGTTTTAACTCTCCTCTTCCATTAAAAACAATGAGTTCAGTCAGTTTCACTCTCAGCTTGTGCTGCGGCTCAATCAACATAAGGTTAACTCAACACTTCTGCACACCCACTCGCACAAATGAGCCGTAAAGGACAATAAAGTAGCAGGAAGGTGAAGTGATGGGAGAGCGACGCTGCTGCTGCTCAGTTTGCATGCTGCGCAGTCGAGAAGCACAGCTTCAGTGTATACGGGTACGGCCCACTGGGGTTCTTCATCTGGTGATGGTTCATCATAGCAAGGGCTTCCATAGCATCATTAACAGACTCCCACTCCAGAAGCCCTGACGAACTCCTCTCTGATGTGGAACCTTTGGCTGCGAAAAGTTTGACATTGGAAGGACTCTTTACACCCAGTTCTTCACAGATCCTGGTGAAGGACTCTGGTGAAGCCTCAGGTGCTGCGTTGAAAAAGTGGAGGACGTTGCTGGGGTGCTGAATGCGGTTCTTTGCCGCCTGCTCTGGAGAAGTGAAGCGGTTATTTCTGCTGCCATGAAAGTCTTTGAAGCTGCTGGTCCCGTCCTCTAGCTCATATGACTGGCCGGGCATGATGGCCTGCTGCTTAGACACACACGTTGAGCTTCTGATTGAACAGGAAGTTGTTGTTGAGATGTGAGATGGCACGATCCACTGCATAGCAGTCTCCCATCTCCACCATGGCAGCTCCAGGCTTGCTCTTCATGAATTTCACCCGTTCCACATTGCCATACAGGCAGAAGATGTTGAAGACCCTGTCCGCGTTTATTTTAACTGGATCCAGGCCGTAGACCATGATCACCGGTGAGTCTGCATGTGCGCCATATTCACCTGGGGGCGGAGGTGGGGGACCGTATTGTCCACCGTAACGCTGACTGGTTCCACCGCGCCTTGGACCACCCATGGGTGGCCCCATCCGTCGGCCTTCATAGGGTCCACCATAGCTCTCTTCTTGGTATCC
>TU346737
GAGGGGTTGAACTGCTGTAAAACATTTTAAAACATGAGTCACAATTGTTCCCTTGCGAAAGCAAATCACAACGAAGACCCATTATCACTTTTTATTTTACAATCAGAAAAAAAAAAAAAAAAAAAATGCAATCTTCTTTACAGGGTTACATTTCTAAAAGTGAGGTGCTGAGCACAGAGCTAACAGTCGATCATAGTAAGCAATAAAAAAAAAAAGAACAAAAACGGTAACAAAACCAAAATACTGGTACAAAAGCGTTTTAACTCTCCTCTTCCATTAAAAACAATGAGTTCAGTCAGTTTCACTCTCAGCTTGTGCTGCGGCTCAATCAACATAAGGTTAACTCAACACTTCTGCACACCCACTCGCACAAATGAGCCGTAAAGGACAATAAAGTAGCAGGAAGGTGAAGTGATGGGAGAGCGACGCTGCTGCTGCTCAGTTTGCATGCTGCGCAGTCGAGAAGCACAGCTTCAGTGTATACGGGTACGGCCCACTGGGGTTCTTCATCTGGTGATGGTTCATCATAGCAAGGGCTTCCATAGCATCATTAACAGACTCCCACTCCAGAAGCCCTGACGAACTCCTCTCTGATGTGGAACCTTTGGCTGCGAAAAGTTTGACATTGGAAGGACTCTTTACACCCAGTTCTTCACAGATCCTGGTGAAGGACTCTGGTGAAGCCTCAGGTGCTGCGTTGAAAAAGTGGAGGACGTTGCTGGGGTGCTGAATGCGGTTCTTTGCCGCCTGCTCTGGAGAAGTGAAGCGGTTATTTCTGCTGCCATGAAAGTCTTTGAAGCTGCTGGTCCCGTCCTCTAGCTCATATGACTGGCCGGGCATGATGGCCTGCTGCTTAGACACACATACGTTGAGCTTCTGATTGAACAGGAAGTTGTTGTTGAGATGTGAGATGGCACGATCCACTGCATAGCAGTCTCCCATCTCCACCATGGCAGCTCCAGGCTTGCTCTTCATGAATTTCACCTACATTCAGAAGAGAAAAATGGGCTTTCAAATGAAGCTGTTTGGTTTTGGACAGTGTCTGACTCATGTATTGCTGTTGTACGTACCCGTTCCACATTGCCATACAGGCAGAAGATGTTGAAGACCCTGTCCGCGTTTATTTTAACTGGATCCAGGCCGTAGACCATGATCACCGGTGAGTCTGCATGTGCGCCATATTCACCTGGGGGCGGAGGTGGGGGACCGTATTGTCCACCGTAACGCTGACTGGTTCCACCGCGCCTTGGACCACCCATGGGTGGCCCCATCCGTCGGCCTTCATAGGGTCCACCATAGCTCTCTTCTTGGTATCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU346736 False 1228 lncRNA 0.48 6 2878272 2883232
TU346737 True 1316 lncRNA 0.47 5 2878272 2883232

Neighbor

gene id symbol gene type direction distance location
CI01000092_02818349_02838255 NA coding upstream 40017 2817620 ~ 2838255 (+)
CI01000092_02739990_02745224 NA coding upstream 133025 2739990 ~ 2745247 (+)
CI01000092_02721458_02724152 NA coding upstream 154120 2721393 ~ 2724152 (+)
CI01000092_02661524_02662121 NA coding upstream 216099 2661383 ~ 2662183 (+)
CI01000092_02470059_02471839 OR112-1 coding upstream 406321 2469352 ~ 2471951 (+)
CI01000092_02958119_02966042 WRB coding downstream 74792 2958024 ~ 2966463 (+)
CI01000092_02977237_02979350 SH3BGR coding downstream 94005 2977237 ~ 2979378 (+)
CI01000092_03007267_03029327 NA coding downstream 124035 3007267 ~ 3029327 (+)
CI01000092_03080030_03082866 PCP4 coding downstream 196330 3079562 ~ 3083624 (+)
CI01000092_03329908_03348045 NA coding downstream 446676 3329908 ~ 3348319 (+)
G305262 NA non-coding upstream 433 2877432 ~ 2877839 (+)
G305143 NA non-coding upstream 2249 2871258 ~ 2876023 (+)
G305164 NA non-coding upstream 28829 2846866 ~ 2849443 (+)
G305244 NA non-coding upstream 38943 2839062 ~ 2839329 (+)
G305230 NA non-coding upstream 54765 2823279 ~ 2823507 (+)
G305265 NA non-coding downstream 17458 2900690 ~ 2900968 (+)
G305270 NA non-coding downstream 30847 2914079 ~ 2914380 (+)
G305284 NA non-coding downstream 89005 2972237 ~ 2972444 (+)
G305285 NA non-coding downstream 89290 2972522 ~ 2972808 (+)
G304938 NA other upstream 560038 2317792 ~ 2318234 (+)
G303768 NA other upstream 1561749 1315443 ~ 1316523 (+)
G305584 NA other downstream 784076 3667308 ~ 3667965 (+)
G305596 NA other downstream 843115 3726347 ~ 3863135 (+)

Expression


Co-expression Network