G305493


Basic Information

Item Value
gene id G305493
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000092
NCBI id null
chromosome length 5370156
location 3384815 ~ 3390238 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU347107
CTCCAGACTACCACGACACAACTCCTCGACCTCGTGACCTCTGGCATAGTTGAGCGTTTGCTCAAATAGGGACAATTCTCTATCTCTCAAAGCTTGGAGGGCAATGAACAAGGACTCGTTGATGCCAGGCTTCAGCTTCTCATTTCTCTCAGGCAGGTCACAGTCCCACTGTGTGCTTCTCCAGGCTGCCTGAAAGCGTAGCTCTCGGAGTTCAGGACTCCACTCCACCCCCTCTCTCTCCAGACCGTGAAGATACGTGCTTAGAATACTACACAAGCCAAAGTTCTGCAGACCCTCTACTATGCCAATCTGTCGCGTGACCTCTGGGAGGTTGGAGTGAAGGTCATATGCAACCAAAGCCTTATCCCACATGGCCTCATGTTCATAGGTTCGAATTCTAGTCAAAGGACTGATTAACTTTCCCCCTCCACATCCATACAGGCTGTCCGGTTCTCCAATGCACCTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU347107 True 466 lncRNA 0.51 5 3384815 3390238

Neighbor

gene id symbol gene type direction distance location
CI01000092_03329908_03348045 NA coding upstream 36496 3329908 ~ 3348319 (+)
CI01000092_03080030_03082866 PCP4 coding upstream 301191 3079562 ~ 3083624 (+)
CI01000092_03007267_03029327 NA coding upstream 355488 3007267 ~ 3029327 (+)
CI01000092_02977237_02979350 SH3BGR coding upstream 405437 2977237 ~ 2979378 (+)
CI01000092_02958119_02966042 WRB coding upstream 418352 2958024 ~ 2966463 (+)
CI01000092_03433283_03442900 GLTSCR2 coding downstream 43045 3433283 ~ 3442960 (+)
CI01000092_03478431_03479274 GJD1A coding downstream 88193 3478431 ~ 3479793 (+)
CI01000092_03532136_03542761 SIRT2 coding downstream 141898 3532136 ~ 3542883 (+)
CI01000092_03551674_03573437 NA coding downstream 161436 3551674 ~ 3573492 (+)
CI01000092_03693715_03694890 NA coding downstream 300312 3690550 ~ 3695228 (+)
G305488 NA non-coding upstream 5909 3376206 ~ 3378906 (+)
G305468 NA non-coding upstream 27235 3357325 ~ 3357580 (+)
G305470 NA non-coding upstream 27718 3356844 ~ 3357097 (+)
G305456 NA non-coding upstream 68831 3315685 ~ 3315984 (+)
G305455 NA non-coding upstream 69998 3314585 ~ 3314817 (+)
G305499 NA non-coding downstream 9583 3399821 ~ 3400488 (+)
G305529 NA non-coding downstream 54588 3444826 ~ 3445117 (+)
G305535 NA non-coding downstream 117044 3507282 ~ 3575953 (+)
G305558 NA non-coding downstream 196634 3586872 ~ 3587109 (+)
G305561 NA non-coding downstream 207474 3597712 ~ 3598766 (+)
G304938 NA other upstream 1066581 2317792 ~ 2318234 (+)
G303768 NA other upstream 2068292 1315443 ~ 1316523 (+)
G305584 NA other downstream 277070 3667308 ~ 3667965 (+)
G305596 NA other downstream 336109 3726347 ~ 3863135 (+)

Expression


Co-expression Network