G305666


Basic Information

Item Value
gene id G305666
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000092
NCBI id null
chromosome length 5370156
location 3921032 ~ 3921965 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU347327
AGAAATTATGTCAGCATTAGTCAGATTCATTTATATGAACTGAAATGACAGAAGAAAGGGATGATGCTGATGAGTTCTGTATCGTTATCAGACATGAAAAAGCTTGATTGTAAAAGATTAATGACTGGAAATAGCAGATGTATGTTCAGAAAATTAAATCTGAAAGTAAATACAAACCAATCAATTTCTGAATAACCACAATTATGTGAAAGAGTATGGGGTTTTCATGTTTTATTATGAGCCATATTCATTGTTCATGTTCAAATGTTCAACCACCCACTATATAAGCCCAAAACTTTCTTGTGAACAGACAAAAGTATGTAGGTTTTGGACTGACTTTGTTTTACTGTAAACATAATGTCCATAAAAATGTAATTCTGGGAAATGTGCCATGCACAATCTCTATTATGGCATGCTGAGATCATATCCAAACACTGTGTGCTTATTCTGTAGCTATAATATGAGGTGATCCCTGGACACAGACAGGCCGTGGCTTCAGGTCATGTATGGGCTTTAAAGGTAGAGTATGTTTTATGTTAAAATACATTCTCTTACCCCGTTTTTTGTTCATTGACTACTATTAGTAAGCCATTCATGGGTTTATCTCCCCCAGAAGTGTAAACACTGAGCCTCCCAGGCACCATCTAAACATTGAGAGCATTCACCCAGATCTGTCAATCTCTTTCCAGCTCAACCAATAGTGAGAGTTTGGGGCGTGGCTACTGTAGCAGGCGGAGCCAGAGGGTGTTTAGCTGGTATGGGACAATGGCTGATGTGTTACATCAGCTTCGATTATAGAAGTGCAAGCCAAATTTCACTGCATTTACACCTTCAAAGATTAAACAGGTCATGAACATGTCAAACTGAACAATGCAACATTATCATGCACCCATTCAGAAAGACAAATGTACCAGTTTGTAATTTTTACTCTGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU347327 True 934 lncRNA 0.38 1 3921032 3921965

Neighbor

gene id symbol gene type direction distance location
CI01000092_03828205_03831437 NA coding upstream 89257 3828205 ~ 3831775 (+)
CI01000092_03816152_03827312 AXL coding upstream 93671 3816152 ~ 3827361 (+)
CI01000092_03725440_03728304 NA coding upstream 192707 3723043 ~ 3728325 (+)
CI01000092_03693715_03694890 NA coding upstream 225804 3690550 ~ 3695228 (+)
CI01000092_03551674_03573437 NA coding upstream 347540 3551674 ~ 3573492 (+)
CI01000092_04205017_04213986 NA coding downstream 283052 4205017 ~ 4214128 (+)
CI01000092_04218446_04223477 NA coding downstream 296481 4218446 ~ 4224664 (+)
CI01000092_04284298_04291859 NA coding downstream 362333 4284298 ~ 4291859 (+)
CI01000092_04335830_04347365 MED17 coding downstream 413865 4335830 ~ 4347554 (+)
CI01000092_04355642_04374319 NA coding downstream 432900 4354865 ~ 4374322 (+)
G305665 NA non-coding upstream 2163 3918485 ~ 3918869 (+)
G305664 NA non-coding upstream 3346 3917332 ~ 3917686 (+)
G305663 NA non-coding upstream 10099 3909763 ~ 3910933 (+)
G305662 NA non-coding upstream 13667 3906990 ~ 3907365 (+)
G305605 NA non-coding upstream 14123 3882689 ~ 3906909 (+)
G305667 NA non-coding downstream 232 3922197 ~ 3922444 (+)
G305668 NA non-coding downstream 726 3922691 ~ 3923720 (+)
G305669 NA non-coding downstream 1884 3923849 ~ 3925386 (+)
G305671 NA non-coding downstream 5222 3927187 ~ 3927426 (+)
G305672 NA non-coding downstream 6440 3928405 ~ 3928662 (+)
G305596 NA other upstream 59699 3726347 ~ 3863135 (+)
G305584 NA other upstream 253067 3667308 ~ 3667965 (+)
G304938 NA other upstream 1602798 2317792 ~ 2318234 (+)
G303768 NA other upstream 2604509 1315443 ~ 1316523 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location