XLOC_010948 (si:dkey-199f5.4)


Basic Information

Item Value
gene id XLOC_010948
gene name si:dkey-199f5.4
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 41840011 ~ 41840668 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00021408
GCTCAAACCTGCCTCTTCTGGAGCCACACCGAGTTCATGTGAAGCCTGTCAACAAGCAGAGCTTCACAAACGGACCTCCAGAACGCAGCATGAGCTCTCCTAAACACAAGACGGAAGTTTCACTGAAAAACATCAGCTTCCCTCTGTCTGACCTGAACGCCGGTGTTGACCACTCTTCATCTCCTCTGGCACATTCTGGGAGTCCAGCAGTGAGGATGGTCAAACCTACACCTCTCCGCCAGCATCATGTTGCTGCTCCCACACGCTTGTCTGTATTGAAGCCAAGCTGTGTTTCTGTAAAGCCTTTCGATGAACTCCCTTCATGTTCGTCTGATCTGAAAGGGAAGCCTCAACTTTCCTTACCCAGACTGCCAGGCTTTACAAGTCGACTAGTGAACAAGCGTGAGTCTTGTCCACTTGAGGATGAGGATGTCAGGATGAAGAGGGCTCAGCCAGCAAAAAGTAACCCACTTCTGCTGTCAAGATTCCCCTCTGCAGTCTGTTTTTGAGTTTACAGAACTGCTACAAATCTTCCTTTGTGCATCAATAAAttgaatattgaaaaaata

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000110483

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00021408 True 569 mRNA 0.48 2 41840011 41840668

Neighbor

gene id symbol gene type direction distance location
XLOC_010947 si:dkey-199f5.7 coding downstream 32614 41806740 ~ 41807397 (-)
XLOC_010946 psmc4 coding downstream 34771 41794715 ~ 41805240 (-)
XLOC_010945 si:dkey-199f5.8 coding downstream 52590 41740365 ~ 41787421 (-)
XLOC_010944 NA coding downstream 102013 41684868 ~ 41737998 (-)
XLOC_010943 atp2c1 coding downstream 172910 41585645 ~ 41667101 (-)
XLOC_010949 si:dkey-199f5.3 coding upstream 13047 41853715 ~ 41855008 (-)
XLOC_010950 zgc:194418 coding upstream 26508 41867176 ~ 41867833 (-)
XLOC_010951 CR318611.1 coding upstream 41777 41882445 ~ 41882560 (-)
XLOC_010952 gramd1a coding upstream 62281 41902949 ~ 41961194 (-)
XLOC_010953 BX649388.3 coding upstream 107407 41948075 ~ 41949116 (-)
XLOC_010626 CR392024.2 misc downstream 20944836 20895112 ~ 20895175 (-)
XLOC_010942 BX005012.3 non-coding downstream 297148 41542079 ~ 41542863 (-)
XLOC_010940 NA non-coding downstream 310998 41523038 ~ 41529013 (-)
XLOC_010934 NA non-coding downstream 731299 41103491 ~ 41108712 (-)
XLOC_010933 NA non-coding downstream 790117 41042994 ~ 41049894 (-)
XLOC_010954 BX649388.1 non-coding upstream 115187 41955855 ~ 41965309 (-)
XLOC_010970 CR854827.1 non-coding upstream 1033072 42873740 ~ 42874709 (-)
XLOC_010975 NA non-coding upstream 1132417 42973085 ~ 42974540 (-)

Expression


Co-expression Network