XLOC_010949 (si:dkey-199f5.3)


Basic Information

Item Value
gene id XLOC_010949
gene name si:dkey-199f5.3
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 41853715 ~ 41855008 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00021409
TGGAGGTTTCAGCGAAAAACATCAGCTGTGGTTCCTCTGAGTCTGGCCTAAATGCCAGTGTTGAGCCTTCCTCCTCTGTTCAGCTTCGTTCTGGGAGTCGAACACTGAGGATTGACCAGCTTACTCCTCTCTGTCGGCAACTGATTGCCAGGCGCTCAATCCTACCTGCTCTGAAGCCAAAAACTGTTCCTGTGAAGTGTGTCAAAAAGCAGATCTTCACAGATGGACATCTGAAAGCTAGAGCAGTGAGCGCTCCTAGACCTCAGATAAAGGTTTCAGTGAAAGACATCTGCTACCCGTCTGACCTGACTAGTGTTGACCATTCTCCTAATTCTGGGAGTCCAGCAGTGAGGATGGACACACATACGCCTCACCGCCAGCAGTCTGTTGCTGTGCTGTCAAACCTGCCTGTTTTGGAGTCCAAGTATCATGTGAAGCCTGTCAACCAGCAGAGCTTCACAGATGGACCTCCAAAACATCAGGTGAAGGTTTCAGTGAGAAACATCAGCTACCCTGCATGTGTGTCTGGCCTGAATGCCAGTGTTGACCGGCCCTCATCTGTTCTGCCTCCATCTGGAAGTAGAGCAGTAAGGATGGATGAACGCTTGCCTCTCCACCGGCAGTCAGCTGCTGTGTGCTCAAACCTGCCTCTTCTGGAGCCACACCGAGTTCATGTGAAGCCTGTCAACAAGCAGAGCTTCACAAACGGACCTCCAGAACGCAGCATGAGCTCTCCTAAACACAAGACGGAAGTTTCACTGAAAAACATCAGCTTCCCTCTGTCTGACCTGAACGCCGATGTTGACCGCTCTTCATCTCTTCTGGCACATTCTGGGAGTCCAGCAGTGAGAATGGTCAAACCTACACCTCTCCGCCAGCATCATGTTGCTGCTCCCACACGCTTGTCTGTATTGAAGCCAAGCTGTGTTTCTGTAAAGCCTTTCGATGAACTCCCTTCATGTTCGTCTGATCTGAAAGTGAAGCCTCAACTTTCCTTACCCAGACTGCCAGGCTTTACAAGTCGACTAGTGAACAAGCGTGAGTCTtgtCCATTTGAGGATGAGGATGTCAGGACGAAGAGGGCTCAGCCAGCAAAAAGTAACACACTTCTGCTGTCAAGATTTCCCTCTGCAGTCTGTTTTTGAGTTTACAGAACTGCTACAAATCTTCCTTTGTTCATCAATAAATtgattattgaaaaaata

Function

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-100921-83 No description available

Ensembl:

ensembl_id ENSDARG00000106515

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00021409 True 1205 mRNA 0.49 2 41853715 41855008

Neighbor

gene id symbol gene type direction distance location
XLOC_010948 si:dkey-199f5.4 coding downstream 13047 41840011 ~ 41840668 (-)
XLOC_010947 si:dkey-199f5.7 coding downstream 46318 41806740 ~ 41807397 (-)
XLOC_010946 psmc4 coding downstream 48475 41794715 ~ 41805240 (-)
XLOC_010945 si:dkey-199f5.8 coding downstream 66294 41740365 ~ 41787421 (-)
XLOC_010944 NA coding downstream 115717 41684868 ~ 41737998 (-)
XLOC_010950 zgc:194418 coding upstream 12168 41867176 ~ 41867833 (-)
XLOC_010951 CR318611.1 coding upstream 27437 41882445 ~ 41882560 (-)
XLOC_010952 gramd1a coding upstream 47941 41902949 ~ 41961194 (-)
XLOC_010953 BX649388.3 coding upstream 93067 41948075 ~ 41949116 (-)
XLOC_010954 BX649388.1 coding upstream 100847 41955855 ~ 41965309 (-)
XLOC_010626 CR392024.2 misc downstream 20958540 20895112 ~ 20895175 (-)
XLOC_010942 BX005012.3 non-coding downstream 310852 41542079 ~ 41542863 (-)
XLOC_010940 NA non-coding downstream 324702 41523038 ~ 41529013 (-)
XLOC_010934 NA non-coding downstream 745003 41103491 ~ 41108712 (-)
XLOC_010933 NA non-coding downstream 803821 41042994 ~ 41049894 (-)
XLOC_010970 CR854827.1 non-coding upstream 1018732 42873740 ~ 42874709 (-)
XLOC_010975 NA non-coding upstream 1118077 42973085 ~ 42974540 (-)

Expression


Co-expression Network