Item | Value |
---|---|
gene id | G305704 |
gene name | NA |
gene type | non-coding |
species | grasscarp (Ctenopharyngodon idella) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | CI01000092 |
NCBI id | null |
chromosome length | 5370156 |
location | 4091538 ~ 4091789 (+) |
genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
id | name | namespace |
---|---|---|
GO:0016071 | mRNA metabolic process | biological_process |
GO:0000375 | RNA splicing, via transesterification reactions | biological_process |
GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | biological_process |
GO:0006397 | mRNA processing | biological_process |
GO:0000398 | mRNA splicing, via spliceosome | biological_process |
GO:0016607 | nuclear speck | cellular_component |
GO:0005681 | spliceosomal complex | cellular_component |
GO:0005685 | U1 snRNP | cellular_component |
id | description |
---|---|
ko03040 | Spliceosome |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU347366 | True | 252 | lncRNA | 0.42 | 1 | 4091538 | 4091789 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
CI01000092_03828205_03831437 | NA | coding | upstream | 259763 | 3828205 ~ 3831775 (+) |
CI01000092_03816152_03827312 | AXL | coding | upstream | 264177 | 3816152 ~ 3827361 (+) |
CI01000092_03725440_03728304 | NA | coding | upstream | 363213 | 3723043 ~ 3728325 (+) |
CI01000092_03693715_03694890 | NA | coding | upstream | 396310 | 3690550 ~ 3695228 (+) |
CI01000092_03551674_03573437 | NA | coding | upstream | 518046 | 3551674 ~ 3573492 (+) |
CI01000092_04205017_04213986 | NA | coding | downstream | 113228 | 4205017 ~ 4214128 (+) |
CI01000092_04218446_04223477 | NA | coding | downstream | 126657 | 4218446 ~ 4224664 (+) |
CI01000092_04284298_04291859 | NA | coding | downstream | 192509 | 4284298 ~ 4291859 (+) |
CI01000092_04335830_04347365 | MED17 | coding | downstream | 244041 | 4335830 ~ 4347554 (+) |
CI01000092_04355642_04374319 | NA | coding | downstream | 263076 | 4354865 ~ 4374322 (+) |
G305730 | NA | non-coding | upstream | 2338 | 4088983 ~ 4089200 (+) |
G305729 | NA | non-coding | upstream | 2601 | 4088738 ~ 4088937 (+) |
G305728 | NA | non-coding | upstream | 3895 | 4087377 ~ 4087643 (+) |
G305726 | NA | non-coding | upstream | 6754 | 4084557 ~ 4084784 (+) |
G305725 | NA | non-coding | upstream | 9492 | 4081832 ~ 4082046 (+) |
G305734 | NA | non-coding | downstream | 8681 | 4100470 ~ 4100727 (+) |
G306154 | NA | non-coding | downstream | 46646 | 4138435 ~ 4138686 (+) |
G306165 | NA | non-coding | downstream | 60702 | 4152491 ~ 4152770 (+) |
G306173 | NA | non-coding | downstream | 69258 | 4161047 ~ 4161434 (+) |
G306200 | NA | non-coding | downstream | 119819 | 4211608 ~ 4212050 (+) |
G305596 | NA | other | upstream | 230205 | 3726347 ~ 3863135 (+) |
G305584 | NA | other | upstream | 423573 | 3667308 ~ 3667965 (+) |
G304938 | NA | other | upstream | 1773304 | 2317792 ~ 2318234 (+) |
G303768 | NA | other | upstream | 2775015 | 1315443 ~ 1316523 (+) |