XLOC_010969 (txnipb)


Basic Information

Item Value
gene id XLOC_010969
gene name txnipb
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 42869054 ~ 42872572 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00021442
CCGACAGAATAGTCACCAACAGATTTCCAAAACATCTAAAATAGTATTATAATAGATAACATCAGAACGTAATGGTGAGCTTGTTGCGCAACTGATTCATTCACTTTTAAAACAACTCAGAAGGTACCTTTAATTTGAGTATcgtaaaaattattcaaaaactAGCTTAAAAAGAAAAATGGGCGTACTGACGAAGAAACCCAAGGCCTTCGAGGTTCAAATGAGTGACCCAAACAAGATCGCGTACAGCGGCGGAGATAAAGTGGCCGGGCGGGTGATCGTGGAGGTGGCGGAGCTGCTGAAGGTCTCCGCCGTCAAACTGTTCGGAGTCGGATGCGCTAAAGTCAATTATAAAAAGGGAAAACTGCACTGCAGCGAGGAGATTGAGTACCTGAAATATGAAGAAATTCTTCATCTTGATCATCATTCAACAACAGATGATGAAGGCTCCATCACTCTCAGGCCTGGAAACAGATACGAATTCATGTTTGGGTTCGAGCTTCCTCAGTCAGGGTGCTTAGTTTCATCTTATGAGGGGAAGTTTGGCTCAGTCCAGTACTACGTGAGGGCAGTCATGGAGAAATCATCCCAGACGTTTGCAGAATGCAAGCGATATTTCGAGGTGGTGGAACCCATTGATGTGAACACTCAAGAGCTCATGGCTCCGGTTAAAGGATCGAAACAGAAGAAAGTCACCTGCATGTTTATTCCCGATGGCAGCGTTTCAATAGTTGCTAGCATAGGCCGCAAGGGTTACTGCGAAGGAGAAGACATTTGCATCGATGCTCAGTTCGAGAACACCAGCTCTCGGATTGTCATTCCCAAAGCCGCCATCATAGCCAAGCACATTTACCTGGCCAATGGTCGCACCAAAGTGTTCGAAGAGAAACTCACTTCTGTTAGGGGAAACCACATCATCTCTGGCATGGGTGATATTTGGCAGGGCAGAGTCCTCCGTGTGCCCAAGCTGAAGCCCACCATCTTAGGCTGTGACATTATTCACGTCGACTACTCTCTAAGGATCTACTTGCACATCCCAGGAAGTGAAAAGCTGATCCTAGAACTGCCCCTGGTCATTGGGACGATCCCCTACAATGGCATGAACAGTCGCACCAGCAGCATGAGCAGCCAGGAGAGCGCCTCTAGTACCTGCGTGTCACTCCCGTCTTCTCCACCCAGCTACAGCAACATCTCCAACCGCATGGATAGTTCGTTTATTCCTCTGCTGGATGATTACGATGAGGATGACAGTCCAATCTTCATGCAGATTCATCATCCTCTCCCCCCTCCTCCACTGTACACTgagCAGCATATCTGAGACTGCACTGGAAGTGGAGTTTTTTCAATCGCTGCCTCAAAATATTCAACTCCAGATGAAGATCAAATGGAGGAAGATTCAGATTTCGAAAAAAGGACCATGCATACTTGTGGACTATCTATCTTTGGTGAAGTCATCTGAGGGCGATTTATTCAATCACAGGACATTTTTGCTGATGTAAGAATCCATCTTTTGAATTCTACAATCTGTGTGTTTAATTGTGAACCGTCCTCAGCATCTGAGAGTTTGTGGATTTATCATTTTGCCATATTGGCGCAATATTCAACCGGCTCTTTTTCCAAATTGGAATGTATAGAGTGTATGTTCATTCATATCCAAGGGACTTATAATTTTGTGCTGTTTTGTGAGTGGAAACCATATTGCGTATCATATTGAGTTGTTTGTTTGCTCACCTGCATGGGTATTTCTAATTAAATATAGAAATCAGAATATGCATTTATATGATTATATACAACAGACATATGTAGTCAGTTTGCTATAGTCTGTAATAGAGTATCATTGCCagatgtcttgaaaaatatttgtattaatttttttatttgaacatcACAGTTCTACCGATACAATAAAACATTCAATTATCAAA
>TCONS_00021441
CCGACAGAATAGTCACCAACAGATTTCCAAAACATCTAAAATAGTATTATAATAGATAACATCAGAACGTAATGGTGAGCTTGTTGCGCAACTGATTCATTCACTTTTAAAACAACTCAGAAGGTACCTTTAATTTGAGTATcgtaaaaattattcaaaaactAGCTTAAAAAGAAAAATGGGCGTACTGACGAAGAAACCCAAGGCCTTCGAGGTTCAAATGAGTGACCCAAACAAGATCGCGTACAGCGGCGGAGATAAAGTGGCCGGGCGGGTGATCGTGGAGGTGGCGGAGCTGCTGAAGGTCTCCGCCGTCAAACTGTTCGGAGTCGGATGCGCTAAAGTCAATTATAAAAAGGGAAAACTGCACTGCAGCGAGGAGATTGAGTACCTGAAATATGAAGAAATTCTTCATCTTGATCATCATTCAACAACAGATGATGAAGGCTCCATCACTCTCAGGCCTGGAAACAGATACGAATTCATGTTTGGGTTCGAGCTTCCTCAGTCAGGGTGCTTAGTTTCATCTTATGAGGGGAAGTTTGGCTCAGTCCAGTACTACGTGAGGGCAGTCATGGAGAAATCATCCCAGACGTTTGCAGAATGCAAGCGATATTTCGAGGTGGTGGAACCCATTGATGTGAACACTCAAGAGCTCATGGCTCCGGTTAAAGGATCGAAACAGAAGAAAGTCACCTGCATGTTTATTCCCGATGGCAGCGTTTCAATAGTTGCTAGCATAGGCCGCAAGGGTTACTGCGAAGGAGAAGACATTTGCATCGATGCTCAGTTCGAGAACACCAGCTCTCGGATTGTCATTCCCAAAGCCGCCATCATAGCCAAGCACATTTACCTGGCCAATGGTCGCACCAAAGTGTTCGAAGAGAAACTCACTTCTGTTAGGGGAAACCACATCATCTCTGGCATGGGTGATATTTGGCAGGGCAGAGTCCTCCGTGTGCCCAAGCTGAAGCCCACCATCTTAGGCTGTGACATTATTCACGTCGACTACTCTCTAAGGATCTACTTGCACATCCCAGGAAGTGAAAAGCTGATCCTAGAACTGCCCCTGGTCATTGGGACGATCCCCTACAATGGCATGAACAGTCGCACCAGCAGCATGAGCAGCCAGGAGAGCGCCTCTAGTACCTGCGTGTCACTCCCGTCTTCTCCACCCAGCTACAGCAACATCTCCAACCGCATGGATAGTTCGTTTATTCCTCTGCTGGATGATTACGATGAGGATGACAGTCCAATCTTCATGCAGATTCATCATCCTCTCCCCCCTCCTCCACTGTACACTgagCATATCTGAGACTGCACTGGAAGTGGAGTTTTTTCAATCGCTGCCTCAAAATATTCAACTCCAGATGAAGATCAAATGGAGGAAGATTCAGATTTCGAAAAAAGGACCATGCATACTTGTGGACTATCTATCTTTGGTGAAGTCATCTGAGGGCGATTTATTCAATCACAGGACATTTTTGCTGATGTAAGAATCCATCTTTTGAATTCTACAATCTGTGTGTTTAATTGTGAACCGTCCTCAGCATCTGAGAGTTTGTGGATTTATCATTTTGCCATATTGGCGCAATATTCAACCGGCTCTTTTTCCAAATTGGAATGTATAGAGTGTATGTTCATTCATATCCAAGGGACTTATAATTTTGTGCTGTTTTGTGAGTGGAAACCATATTGCGTATCATATTGAGTTGTTTGTTTGCTCACCTGCATGGGTATTTCTAATTAAATATAGAAATCAGAATATGCATTTATATGATTATATACAACAGACATATGTAGTCAGTTTGCTATAGTCTGTAATAGAGTATCATTGCCagatgtcttgaaaaatatttgtattaatttttttatttgaacatcACAGTTCTACCGATACAATAAAACATTCAATTATCAAA
>TCONS_00021443
ACCGACAGAATAGTCACCAACAGATTTCCAAAACATCTAAAATAGTATTATAATAGATAACATCAGAACGTAATGGTGAGCTTGTTGCGCAACTGATTCATTCACTTTTAAAACAACTCAGAAGGTACCTTTAATTTGAGTATcgtaaaaattattcaaaaactAGCTTAAAAAGAAAAATGGGCGTACTGACGAAGAAACCCAAGGCCTTCGAGGTTCAAATGAGTGACCCAAACAAGATCGCGTACAGCGGCGGAGATAAAGTGGCCGGGCGGGTGATCGTGGAGGTGGCGGAGCTGCTGAAGGTCTCCGCCGTCAAACTGTTCGGAGTCGGATGCGCTAAAGTCAATTATAAAAAGGGAAAACTGCACTGCAGCGAGGAGATTGAGTACCTGAAATATGAAGAAATTCTTCATCTTGATCATCATTCAACAACAGATGATGAAGGCTCCATCACTCTCAGGCCTGGAAACAGATACGAATTCATGTTTGGGTTCGAGCTTCCTCAGTCAGGGTGCTTAGTTTCATCTTATGAGGGGAAGTTTGGCTCAGTCCAGTACTACGTGAGGGCAGTCATGGAGAAATCATCCCAGACGTTTGCAGAATGCAAGCGATATTTCGAGGTGGTGGAACCCATTGATGTGAACACTCAAGAGCTCATGGTGATTAATCCCAGACTTGTcacttatattattaaaatatgaatgtatttCAAACATGAAATAGTAATTTGGTACGTCCTGCTTCATTGTAGGCTCCGGTTAAAGGATCGAAACAGAAGAAAGTCACCTGCATGTTTATTCCCGATGGCAGCGTTTCAATAGTTGCTAGCATAGGCCGCAAGGGTTACTGCGAAGGAGAAGACATTTGCATCGATGCTCAGTTCGAGAACACCAGCTCTCGGATTGTCATTCCCAAAGCCGCCATCATAGCCAAGCACATTTACCTGGCCAATGGTCGCACCAAAGTGTTCGAAGAGAAACTCACTTCTGTTAGGGGAAACCACATCATCTCTGGCATGGGTGATATTTGGCAGGGCAGAGTCCTCCGTGTGCCCAAGCTGAAGCCCACCATCTTAGGCTGTGACATTATTCACGTCGACTACTCTCTAAGGATCTACTTGCACATCCCAGGAAGTGAAAAGCTGATCCTAGAACTGCCCCTGGTCATTGGGACGATCCCCTACAATGGCATGAACAGTCGCACCAGCAGCATGAGCAGCCAGGAGAGCGCCTCTAGTACCTGCGTGTCACTCCCGTCTTCTCCACCCAGCTACAGCAACATCTCCAACCGCATGGATAGTTCGTTTATTCCTCTGCTGGATGATTACGATGAGGATGACAGTCCAATCTTCATGCAGATTCATCATCCTCTCCCCCCTCCTCCACTGTACACTgagCAGCATATCTGAGACTGCACTGGAAGTGGAGTTTTTTCAATCGCTGCCTCAAAATATTCAACTCCAGATGAAGATCAAATGGAGGAAGATTCAGATTTCGAAAAAAGGACCATGCATACTTGTGGACTATCTATCTTTGGTGAAGTCATCTGAGGGCGATTTATTCAATCACAGGACATTTTTGCTGATGTAAGAATCCATCTTTTGAATTCTACAATCTGTGTGTTTAATTGTGAACCGTCCTCAGCATCTGAGAGTTTGTGGATTTATCATTTTGCCATATTGGCGCAATATTCAACCGGCTCTTTTTCCAAATTGGAATGTATAGAGTGTATGTTCATTCATATCCAAGGGACTTATAATTTTGTGCTGTTTTGTGAGTGGAAACCATATTGCGTATCATATTGAGTTGTTTGTTTGCTCACCTGCATGGGTATTTCTAATTAAATATAGAAATCAGAATATGCATTTATATGATTATATACAACAGACATATGTAGTCAGTTTGCTATAGTCTGTAATAGAGTATCATTGCCagatgtcttgaaaaatatttgtattaatttttttatttgaacatcACAGTTCTACCGATACAATAAAACATTCAATTATCAAA

Function

symbol description
txnipb Predicted to enable ubiquitin protein ligase binding activity. Predicted to be involved in protein transport. Predicted to be active in cytoplasm. Orthologous to human TXNIP (thioredoxin interacting protein).

GO:

id name namespace
GO:0015031 protein transport biological_process
GO:0005737 cytoplasm cellular_component
GO:0031625 ubiquitin protein ligase binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-040917-1 Predicted to enable ubiquitin protein ligase binding activity. Predicted to be involved in protein transport. Predicted to be active in cytoplasm. Orthologous to human TXNIP (thioredoxin interacting protein).

Ensembl:

ensembl_id ENSDARG00000070000

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00021442 False 1925 mRNA 0.43 6 42869054 42872571
TCONS_00021441 False 1922 mRNA 0.43 6 42869054 42872571
TCONS_00021443 True 2018 processed_transcript 0.42 5 42869054 42872572

Neighbor

gene id symbol gene type direction distance location
XLOC_010968 slc4a7 coding downstream 98990 42693247 ~ 42770064 (-)
XLOC_010967 tbx20 coding downstream 345310 42509011 ~ 42523744 (-)
XLOC_010966 smarcc1a coding downstream 407791 42423530 ~ 42461263 (-)
XLOC_010965 cspg5a coding downstream 478414 42319438 ~ 42390640 (-)
XLOC_010964 ppox coding downstream 562457 42289076 ~ 42306597 (-)
XLOC_010970 CR854827.1 coding upstream 1168 42873740 ~ 42874709 (-)
XLOC_010971 hjv coding upstream 11227 42883799 ~ 42894628 (-)
XLOC_010972 thbs3a coding upstream 27666 42900238 ~ 42933332 (-)
XLOC_010973 mtx1a coding upstream 66287 42938859 ~ 42965192 (-)
XLOC_010974 si:ch211-135n15.3 coding upstream 95525 42968097 ~ 42969598 (-)
XLOC_010626 CR392024.2 misc downstream 21973879 20895112 ~ 20895175 (-)
XLOC_010954 BX649388.1 non-coding downstream 903745 41955855 ~ 41965309 (-)
XLOC_010953 BX649388.3 non-coding downstream 919938 41948075 ~ 41949116 (-)
XLOC_010951 CR318611.1 non-coding downstream 986494 41882445 ~ 41882560 (-)
XLOC_010944 NA non-coding downstream 1131056 41684868 ~ 41737998 (-)
XLOC_010942 BX005012.3 non-coding downstream 1326191 41542079 ~ 41542863 (-)
XLOC_010975 NA non-coding upstream 100513 42973085 ~ 42974540 (-)
XLOC_010976 NA non-coding upstream 101975 42974547 ~ 42993892 (-)
XLOC_010981 NA non-coding upstream 246541 43119113 ~ 43124227 (-)
XLOC_010987 NA non-coding upstream 486353 43358925 ~ 43368871 (-)

Expression


Co-expression Network