XLOC_010970 (CR854827.1)


Basic Information

Item Value
gene id XLOC_010970
gene name CR854827.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 42873740 ~ 42874709 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00021444
tggtatttaccctgtaagtacagggaacaaggaggtaacaagagaggaacaaagcttcactttaatttacaaccctcaaatgtggtatttaccctgtaagtacagggaacaaggaggtaacaagagaggaacaaagcttcactttaatttacaaccctcaaatgtggtgtttaccctgtaagtacagggaacaaggaggtaacaagggaggaacaaagcttcactttaatttacaaccctcaaatgtggtatttaccctgtaagtacagggaacaaggagggaacaaatactgtatttaccctttaactacagggaacaaagagggaagaagctgaactttaacatactagtgtatacttgaacactaagaacagagtaaactacagcagcagtttttattgattgaagaccaaattactagatttttctataaagcatcagctatacatttactgaaatgcaacagttagcccccctgtgcaacagcagtaaagatgcgagcctgttttaatctgcattgaaccctgacggtaggcctatgtcatgcaaagttatttgttgatagtgagttatggagacattgatggctttggtgagatcgacgagtaaacataaggtaagtagtgtatggaaatatattttatattgaattgcagatttaaaatacatacagtatacaataagtgttcataatttcacaggttgtaaaccttttattcattaaacaccccatataaaacccaagcactgaataagaatactaatgtactcacgcaggtgcatatacagtacatttgcagatagcaataggttgtc

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000097222

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00021444 True 817 processed_transcript 0.37 2 42873740 42874709

Neighbor

gene id symbol gene type direction distance location
XLOC_010969 txnipb coding downstream 1168 42869054 ~ 42872572 (-)
XLOC_010968 slc4a7 coding downstream 103676 42693247 ~ 42770064 (-)
XLOC_010967 tbx20 coding downstream 349996 42509011 ~ 42523744 (-)
XLOC_010966 smarcc1a coding downstream 412477 42423530 ~ 42461263 (-)
XLOC_010965 cspg5a coding downstream 483100 42319438 ~ 42390640 (-)
XLOC_010971 hjv coding upstream 9090 42883799 ~ 42894628 (-)
XLOC_010972 thbs3a coding upstream 25529 42900238 ~ 42933332 (-)
XLOC_010973 mtx1a coding upstream 64150 42938859 ~ 42965192 (-)
XLOC_010974 si:ch211-135n15.3 coding upstream 93388 42968097 ~ 42969598 (-)
XLOC_010975 NA coding upstream 98376 42973085 ~ 42974540 (-)
XLOC_010626 CR392024.2 misc downstream 21978565 20895112 ~ 20895175 (-)
XLOC_010954 BX649388.1 non-coding downstream 908431 41955855 ~ 41965309 (-)
XLOC_010953 BX649388.3 non-coding downstream 924624 41948075 ~ 41949116 (-)
XLOC_010951 CR318611.1 non-coding downstream 991180 41882445 ~ 41882560 (-)
XLOC_010944 NA non-coding downstream 1135742 41684868 ~ 41737998 (-)
XLOC_010942 BX005012.3 non-coding downstream 1330877 41542079 ~ 41542863 (-)
XLOC_010976 NA non-coding upstream 99838 42974547 ~ 42993892 (-)
XLOC_010981 NA non-coding upstream 244404 43119113 ~ 43124227 (-)
XLOC_010987 NA non-coding upstream 484216 43358925 ~ 43368871 (-)
XLOC_010988 oxr1a non-coding upstream 542923 43417632 ~ 43742343 (-)

Expression


Co-expression Network