XLOC_010974 (si:ch211-135n15.3)


Basic Information

Item Value
gene id XLOC_010974
gene name si:ch211-135n15.3
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 42968097 ~ 42969598 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00021449
CATTATCGCCTGTTGGATCCagtttgtcgttgttgttgtgaTATAATCTTCACTTCACTTTTTCAACATGTGGTCTAACAGTCAGTCCGTGCCACGATCTCCAGAACACCGAGACGTGAGCTCTCCTAAGCGTCAGATGAAAGTTTCAGTGAAAAGTGTCAGCTACTTTTTACCTGTGTCTGATCTGAACGCCAATGCTGACCGTTCCTCGTCTGATCTGTCCCATTCCTGGAGCAGTTCAGTGAGGATGGACACAAGTACGCCTCTCCATCAGCATGAGGTTGTATGCTCAAACCTGACTGTTCTGAAGCTGCGCCATGTTCCTGTGAAACCTGCTGAGAAGCAGAAGTTCACTGATGGTCATGGACTGCCAAAACGTCGCGGAGTGAGGTCTCATAAACATATGATGGAGGTTTCACTGAAAGACATCAGCTATCTTTCATGTGAGCCTGACCTGAATGCCAGTGTTGACCATTCTTCATCTCTTCTGCTCCATTCTGAGAGTCGAGAAGAGAGAATGGATAAACGTAGGCCTCTCCGTCATCATCCTGCTCCACGCTCCAAACTGCCCATTCTGAAGTCAAAGTGTGTTCCTGTGAAGCCTGTCAACCAGCAGAGTTTCACAGATGAACCCTCAGAATGGATGGGCGTGGACTTGAATCAAAAAGGGAGCCAATCAGTGAGACTGGATAAATGTAAGCCTATCCGTCATCATCCTGCTGCTCCACGCTCCAAACTGCCCATTCTGAAATCAAAGTGTGTTCCTGTGAAGCCTGTCAACCAGCAGAGTTTCACAGATGAACCCTCAGAATGGCTGGGCGTGGACTCCAATCATATTATGAAAGGGAGCCAATCAGTGAGAATGAAGAAGCGTAGGCCTCTCCGACATCATCCTGATGCTCCACGATCAAAACTGCCCATTCTAAAGACAAAGTGTGTTCCTGTGAAGCCTGTCAACCAGCAGAGTTTCACAGATGAACCCGCAGAATGGCTGGACGTGGGGTCGAATCATATAATGAAAGGGAGGCAACCTGTGAGGATGGACAAGCGTACATCTCTGCGCAAACATCCTGTTGCTGGACGCTCAAAACTGCCTGTTCTGGAGTCAAAGTGTGTTCCTGTGAAGCCTGTCAGTGGACAGAAGTTCACTGATGGACCTCCAGAGCATCAGATGAAAGTTTCACTGAAAGATCCTCCATGTGAGTCTGAGCTGAATGTCAGTGTTGAGTGTTCCTCATCTCTTCTGGCAGTGAGAG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000088189

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00021449 True 1256 mRNA 0.48 4 42968097 42969598

Neighbor

gene id symbol gene type direction distance location
XLOC_010973 mtx1a coding downstream 2905 42938859 ~ 42965192 (-)
XLOC_010972 thbs3a coding downstream 34765 42900238 ~ 42933332 (-)
XLOC_010971 hjv coding downstream 73469 42883799 ~ 42894628 (-)
XLOC_010970 CR854827.1 coding downstream 93388 42873740 ~ 42874709 (-)
XLOC_010969 txnipb coding downstream 95525 42869054 ~ 42872572 (-)
XLOC_010975 NA coding upstream 3487 42973085 ~ 42974540 (-)
XLOC_010976 NA coding upstream 4949 42974547 ~ 42993892 (-)
XLOC_010977 nudt17 coding upstream 31230 43000828 ~ 43011501 (-)
XLOC_010978 si:dkey-7j14.5 coding upstream 44819 43014417 ~ 43026273 (-)
XLOC_010979 si:dkey-7j14.6 coding upstream 58481 43028079 ~ 43041450 (-)
XLOC_010626 CR392024.2 misc downstream 22072922 20895112 ~ 20895175 (-)
XLOC_010954 BX649388.1 non-coding downstream 1002788 41955855 ~ 41965309 (-)
XLOC_010953 BX649388.3 non-coding downstream 1018981 41948075 ~ 41949116 (-)
XLOC_010951 CR318611.1 non-coding downstream 1085537 41882445 ~ 41882560 (-)
XLOC_010944 NA non-coding downstream 1230099 41684868 ~ 41737998 (-)
XLOC_010981 NA non-coding upstream 149515 43119113 ~ 43124227 (-)
XLOC_010987 NA non-coding upstream 389327 43358925 ~ 43368871 (-)
XLOC_010988 oxr1a non-coding upstream 448034 43417632 ~ 43742343 (-)

Expression


Co-expression Network