CI01000095_00170941_00172566


Basic Information

Item Value
gene id CI01000095_00170941_00172566
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000095
NCBI id null
chromosome length 6456983
location 170941 ~ 172566 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000095_00170941_00172566.mRNA
ATATTCTTTAGAAGGCCCAGATGTTCCTTTTTCCATCAATGAAATATCTGGAGAGTTGTTTACCGTAAGTGCCTTGGACAGAGAGGCAGTGGCTCTGTACAGATTTCTGGTGACTGTCACTGACGGACATCCCACAAAGCCTCTTTCCAGCTCAGCTGCTGTTTCAGTAAAAGTTGAGGATGTGAATGATAACTTTCCATCCTTTCTTTATGGACCATATGTGGCTAATGTTCCTGCTGGGATAACCAAAGGATCAGTTGTCTGCACAGTGATGGCAGAAGATGCAGATGCTGGATTGAACGCAAAACTAAATTTTTCTCTACATGGCCAACAGGCCCATCTCTTCTCAATTAACCCTCGCACAGGAACAGTGTTCACTACAGATTCTGTGAAGAGAAGAAATGACATCACAGTTGATGTCCATGTGCAGGATGGAGCAGATATGCCAAAAATGGACACAACAACCTTGACTGTCAGATTCCAGAATAACTCATACTTTCCTCGAATTGCAATCCAAATATATAAAGATATTCTCTCCGAGGATGCAGCTACTGCGACGCTTGTGGCTATTGTGACTGCAGAAACATCGAGAAACATACCAGTGTCTTTCTATCTGGCCTCTGGAAACTTTGGAGAAGTTTTTGAGCTTCACCACAGCACTGGCGAGCTTACTGTCAAGGATCCCTTGGATTTTGAAACCAACGTGCATTTTCATCTCGTGGTTGAAGCCAGAGACTCAGGGATACCGCCTTTTTCATCATATGCCGAACTTCATATTAATGTCAGTGACGTGAATGATAACCCACCGGTGTTCTCGCAAAGCATCTACAGATGTGACGTGTATGAGAACTTGGCTTCAAGAAGGGTGTGTAGTGTGTTAGCAGCGGATGCCGACTCTGGAGTGTTTGCAGAGGTGGAGTACTTCATTTTAGCTGGTAACATTGGGAGCACATTTAAAATAGACAAAAATCATGGTAGTCTTTCCACAACAAAGCGTTTAGATCGAGAAAATTTACCATGCTATAATCTCACTATCAAGGCCATTGATAAAGAAAACAACAGTCTTTCAGCCATTGCAACGGTTATCATCGTAGTTCTCGACACAAATGATCACGCGCCCCGCTTCTCACAGATTTTCATCGCAGAGGTTCCCGAGGATGCCCCCGTTGGCTTTTCAGTTATTCAGATAACTGCTACAGATGAAGATGTTGGTCTAAATGCTGTCATTGAATATACAATCATTGGCCAAAATAGTGAGTTCCCGTTCAGTATTGATAAAACCACTGGCACTTTACTGGTACTGCTTCCTTTGGACAGAGAAGATCAAGATCATTATATAGTGAAGGTTAACGCCAATGATTCTGCTTGGAGCGTTAGCACAGACATCACTATATACATTACAGATATCAACGACAATACACCGATCTTCTATCAACCACTTTACACCATCACTGTCCCTGAGATGAAGATGCATGAAGTTTTCCTTCTACAAGTTAGCGCTACTGACAGAGATCTTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000095_00170941_00172566.mRNA True 1517 mRNA 0.43 2 170941 172566

Neighbor

gene id symbol gene type direction distance location
CI01000095_00173095_00181309 NA coding upstream 529 173095 ~ 181309 (-)
CI01000095_00183587_00185442 HMGB1B, HMGB1, HMGB1A coding upstream 10653 183219 ~ 186905 (-)
CI01000095_00219520_00237347 HSPH1 coding upstream 46870 219436 ~ 237432 (-)
CI01000095_00790125_00813901 NA coding upstream 616896 789462 ~ 814216 (-)
CI01000095_00914578_00997684 FREM2B, FREM2 coding upstream 742012 914578 ~ 997684 (-)
G309293 NA non-coding downstream 17095 153592 ~ 153846 (-)
G309271 NA non-coding downstream 71836 92363 ~ 99105 (-)
G309270 NA non-coding downstream 72464 91953 ~ 98477 (-)
G309272 NA non-coding downstream 72690 91642 ~ 98251 (-)
G309253 NA non-coding downstream 93752 76763 ~ 77189 (-)
G309295 NA non-coding upstream 15228 187794 ~ 187995 (-)
G309301 NA non-coding upstream 22362 194928 ~ 195145 (-)
G309302 NA non-coding upstream 24638 197204 ~ 197769 (-)
G309304 NA non-coding upstream 29502 202068 ~ 202936 (-)
G309305 NA non-coding upstream 30460 203026 ~ 203634 (-)
G309626 NA other upstream 913022 1085588 ~ 1088166 (-)
G309753 NA other upstream 1006031 1178597 ~ 1181758 (-)
G309815 NA other upstream 2490764 2663330 ~ 2731704 (-)
G310207 NA other upstream 3019532 3192098 ~ 3222668 (-)
CI01000095_03528759_03538412 NA other upstream 3358346 3528463 ~ 3539055 (-)

Expression


Co-expression Network