CI01000095_01537561_01538239


Basic Information

Item Value
gene id CI01000095_01537561_01538239
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000095
NCBI id null
chromosome length 6456983
location 1537546 ~ 1539065 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000095_01537561_01538239.mRNA
ACCACAGTGAGCCAAAACATGTTTTTTTTTTTTTTAAAAATGACACAGATACACAAAGAGATCCACATTGATCCCATTAAACAAACAAACAAATGTATGGTCATGTTTTTAATCACAAGATATATCAGTTTATTCTGTGAAACACAACACCTCATGTTTATTATGCAGTAGGCTGTGTCTGTTCATTCAGCAGGCAATGGATCAGGAATAATCAAGCCAGGTCGAACATCTGTCATATTCATTCTAAAAGCTTAATAACATCATTAATGTCAGTCAGACTTTTTGTCTCTCCTGATCATTTACTAGCTTCATCTAAATAAAAGATTGAAACCTTGAGGTTATGAATGATATTGCTATCTATCTATGAGAAAACAGATAGTCTAGGTTGCACTGTACCCCATGTTTACCTATTTGATCGGCAGGGATCCGTCTATAATCTTCCCTTCGACCTATGTAGGTGCAGACAGGACGCACACTGCAGCCTATACGGTAGTCTACTGCACATAGAGGGCGTTTTCCCAGCATGAGAAACATTTCATCGGTACACCCAGCTGGGTAATGCAAACCCACATACTACATCACTGAACACAAATCAGAGAGGGAAGCAAGCTCAAGTAGAGTGCGGAGCATCTAGACCAGAGTGTATAGTGTGAACCTGCCACATGCGTTTGGACTCTTACTGCACAGCCGGTGGATATTTAATCACTATCGGAGATTTTTTCTCCTTTTAAAGTGGCTCTAAATATATCAGCGAACTTGATTAGACTAAAATACCTCCTGTTCTTGATGATACAGCGCTGTTTTTAAACACCGCGGCTGACAGGATATGGCGAGTGTTCAGCCGGTGGCCACGCCGGGAGATAGAACACCTCATCCCGGCCACAGGCATCACGGAGCCGCCGCCGCGGGCTCCGGTACCGGTGACATGATGATGATGATGTCTTGCTCCGGCTCGGTGGTGCTACCGGCCGGGGTGATAAACCCCTCGGTTCCCATCCGGAATATCAAGACGAAATTCGCAGTGCTCACCGGTCTCATTCAAGTCGGCGAGGTCAGCAATAGAGACATAGTGGAAACAGTGTTGAATCTGTCACTGACATATGGCAAAGTGTCTGTCATACTTATTAACAGTAACCAAACAGGTGTCCTACATGCAACCTGTGGTACTATCCTACACAGGAAAAATGACTCTTGTTCTTCATTAAAAACATCCTTAAAACTAGGTATAATCTCTCTTTTGTTAGACTTTTTGTTAAAAACTATTTGGCAATGAGGGAAGAAAAATAAA

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000095_01537561_01538239.mRNA True 1288 mRNA 0.43 2 1537546 1539065

Neighbor

gene id symbol gene type direction distance location
CI01000095_01200809_01460128 NBEA, NBEAB, NBEAA coding downstream 77418 1200809 ~ 1460128 (-)
CI01000095_00914578_00997684 FREM2B, FREM2 coding downstream 539862 914578 ~ 997684 (-)
CI01000095_00790125_00813901 NA coding downstream 723330 789462 ~ 814216 (-)
CI01000095_00219520_00237347 HSPH1 coding downstream 1300114 219436 ~ 237432 (-)
CI01000095_00183587_00185442 HMGB1B, HMGB1, HMGB1A coding downstream 1350641 183219 ~ 186905 (-)
CI01000095_01543090_01636658 DLC1, STARD13B coding upstream 4025 1543090 ~ 1636658 (-)
CI01000095_01639699_01643103 NA coding upstream 100520 1639585 ~ 1643326 (-)
CI01000095_01675024_01682552 NA coding upstream 134896 1673961 ~ 1682780 (-)
CI01000095_01699194_01700598 NA coding upstream 160004 1699069 ~ 1700816 (-)
CI01000095_01747706_01752312 NA coding upstream 208641 1747706 ~ 1752312 (-)
G309805 NA non-coding downstream 245539 1261954 ~ 1292007 (-)
G309622 NA non-coding downstream 402091 1096224 ~ 1135455 (-)
G309719 NA non-coding downstream 407096 1104785 ~ 1130450 (-)
G309710 NA non-coding downstream 469223 1067935 ~ 1068323 (-)
G309684 NA non-coding downstream 472799 1064180 ~ 1064747 (-)
G309809 NA non-coding upstream 75403 1614468 ~ 1616033 (-)
G309928 NA non-coding upstream 199953 1739018 ~ 1739223 (-)
G309935 NA non-coding upstream 286582 1825647 ~ 1825921 (-)
G309947 NA non-coding upstream 315000 1854065 ~ 1854369 (-)
G309948 NA non-coding upstream 315588 1854653 ~ 1855158 (-)
G309753 NA other downstream 355788 1178597 ~ 1181758 (-)
G309626 NA other downstream 449380 1085588 ~ 1088166 (-)
G309815 NA other upstream 1124265 2663330 ~ 2731704 (-)
G310207 NA other upstream 1653033 3192098 ~ 3222668 (-)
CI01000095_03528759_03538412 NA other upstream 1991847 3528463 ~ 3539055 (-)
G311036 NA other upstream 2820596 4357325 ~ 4362626 (-)
G311701 NA other upstream 3609960 5149025 ~ 5154494 (-)

Expression


Co-expression Network