CI01000095_01747706_01752312


Basic Information

Item Value
gene id CI01000095_01747706_01752312
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000095
NCBI id null
chromosome length 6456983
location 1747706 ~ 1752312 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000095_01747706_01752312.mRNA
ATGGACGAGGCTGCCAGCCAACTGGAGAGAGACCATGTTCACAGCGTGTACGAGAGGATCGCACCCTACTTCAACGACAGCCGCTACAAAGCTTGGCCCAAGGTCAAACAGTTCCTGTTAGAGCAGGAGCCCGGCAGCATCGTGGCTGACGTTGGATGTGGAAATGGCAAATATCTGCACATCAATGAGGAAATCTTCAAGTTGGGCTGTGACGTGTGTCGTCCGTTGGTGGACTGTGCGTGGAGTCAAGGTCACGAGGTGCAGCTCTGCGATGGCCTGCGTTTACCCTACAGAGATGGCTGTTTTGACGCAGTGCTCTCCATTGCAGTCATCCACCACATGTCCACCAAAGAACGGCGCATCCGAGCAATTAAAGAGATGGCACGCACCCTGCGTTTGGGAGGGCGGATCATGATTTACGTTTGGGCCATGGAGCAGAAGAGACGCAAGTTTGAGAAGCAGGACATCTTCGTTCCCTGGAACCCCAATCCCCCTTCATCTCCTGCCCTCAGAGTAGCCGGCCGAACCCGACAGCGAGGCACCGGAACCCAAAGCATCAGCGACGACGACGCTTCCAGCGACAAGCACAGGAAAGTGAAAAGCACATCCTCCATGGTGGATGAGGGCGACTTGATCAGCCCCAGTCAGCCGAAACAACAGAGGCTTTGGTTCTTCTCCAGATCTTTGGATTCAGTGCTGGACTTCGGCAGCCTGACCATGTCCCGCTCCTCTTCCAGCTCTTTACAAACTCCTGTCGATGAAGCGACAGAAAGCAGAAGCCGACGAGCTAGTAGAGGCCTCATCAGGCAGATGTCCAGCCTCTTTTCATCCTCTTCCAGAACCAGTCTAGAAGAAGACGTCTTCATCTCAGAACCTCATGAACAGGTCCATAAATTCGACAACAGAAGTGCTGGGAATGGAAATGAGACTGTTCCTGTGGAGCTTGTCCATGATTGTTCCTCAGTTCCACTGCCCGACTTGGTGTCCTACCAGAGGGATCAGTCGAATCTTGAAGGACACGAGGATGGAAAATCAAGCCTACAAGAGCCCTTGCAGAGGCAGGAAAGCTCAGCTTCTCTTCTGGAAACTGAGGGGATGAATGGACGGAGCAGCGAACAGATGAAGGACTCTTGTCTGCGGTACTACCACGTATTCAGGGAAGGAGAACTGACGCAGTTGATCCAAAACCACGTTGATGACCTCCATGTTCTGCACACTTACTTGGACCACGCCAATTGGTGCGTGGTGGCTGAGAAGGTCCAAGTCTGGAAGGTT

Function

GO:

id name namespace
GO:0005737 cytoplasm cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000095_01747706_01752312.mRNA True 1275 mRNA 0.53 3 1747706 1752312

Neighbor

gene id symbol gene type direction distance location
CI01000095_01699194_01700598 NA coding downstream 46890 1699069 ~ 1700816 (-)
CI01000095_01675024_01682552 NA coding downstream 64926 1673961 ~ 1682780 (-)
CI01000095_01639699_01643103 NA coding downstream 104380 1639585 ~ 1643326 (-)
CI01000095_01543090_01636658 DLC1, STARD13B coding downstream 111048 1543090 ~ 1636658 (-)
CI01000095_01537561_01538239 NA coding downstream 208641 1537546 ~ 1539065 (-)
CI01000095_01753866_01754199 NA coding upstream 1533 1753845 ~ 1754199 (-)
CI01000095_01762546_01807415 PDS5B coding upstream 9720 1762032 ~ 1807474 (-)
CI01000095_01814503_01819719 NA coding upstream 61743 1814055 ~ 1819719 (-)
CI01000095_01821436_01824400 MMP13B, MMP13 coding upstream 68898 1821210 ~ 1824414 (-)
CI01000095_01922388_01929182 MAG coding upstream 169285 1921597 ~ 1929367 (-)
G309928 NA non-coding downstream 8483 1739018 ~ 1739223 (-)
G309809 NA non-coding downstream 131673 1614468 ~ 1616033 (-)
G309805 NA non-coding downstream 455699 1261954 ~ 1292007 (-)
G309622 NA non-coding downstream 612251 1096224 ~ 1135455 (-)
G309719 NA non-coding downstream 617256 1104785 ~ 1130450 (-)
G309935 NA non-coding upstream 73335 1825647 ~ 1825921 (-)
G309947 NA non-coding upstream 101753 1854065 ~ 1854369 (-)
G309948 NA non-coding upstream 102341 1854653 ~ 1855158 (-)
G309934 NA non-coding upstream 109424 1861736 ~ 1893780 (-)
G309781 NA non-coding upstream 126747 1879059 ~ 1915282 (-)
G309753 NA other downstream 565948 1178597 ~ 1181758 (-)
G309626 NA other downstream 659540 1085588 ~ 1088166 (-)
G309815 NA other upstream 911018 2663330 ~ 2731704 (-)
G310207 NA other upstream 1439786 3192098 ~ 3222668 (-)
CI01000095_03528759_03538412 NA other upstream 1778600 3528463 ~ 3539055 (-)
G311036 NA other upstream 2607349 4357325 ~ 4362626 (-)
G311701 NA other upstream 3396713 5149025 ~ 5154494 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location