CI01000095_03034508_03067922


Basic Information

Item Value
gene id CI01000095_03034508_03067922
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000095
NCBI id null
chromosome length 6456983
location 3034270 ~ 3069186 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000095_03034508_03067922.mRNA
AGGCAACAGTATCCTAGTGCGCTGACATAATGCAGGAAGCTGGGAACCTAATTCTGTGCTGAAGATGCATTAGTTCCGCTTTACACTGGCAGGCATGATATCCCTACCATGTGTGTGTGTGTCAGATGTAATGCCAAAAGCATGAAACACGATATTCTTCTCCTCTACTCAGATGTTTGCTGCAGATGAATCATGTTTCACGATTATATTTTATCACCATTTGTGTATGTGATTGTATGTATTTTAATAAAACATCTAATACTAAGTCTCTTTTTTTCAGAATGATGAGGTGGCAAAATGCCATATTCCCATTGCTGGCACAGACACACACCCACACACAAAATAGGTCAGCGAGACCACAGCACCACATCAATGGATGAGTGGAGTTTAGCTTCCTTATTCATTCCATTAACCTGTCATTCACCACCACAACATGAACAGTGCCAATTCATAACTAGGGCATAGAAATAGCCTTCAAACACACACAACAGACCCGATGTGAGTAGATCCAGAATCATTAAAACACAAGACAGTCACTGGAACCATGAAAATACACCAATAACCAATCAGATGTAGTGATTCTCACATGACACACACTCATTTAAAGGGATTGTTCAGACAAAAATCATGTCGTTCCAAACCTATGTGACTGTATTTCTTTTATAGAAAAAAAAAAGGGTTCTAACAACATTGGACCCCATTGACTTTCAATGTATGGACCAAAAACACTGGTCCTTTTTCACATTCAGATTATCTTCATTTATGTTCCACAGAAGAAAGAAATTCAAACAGGTTTGAAATGACACGAAGGTGAGTAAATAACGACAGAATTTTCACATGCTGTATCTGATCCTGGATCACATGCTGTACAGATGCCAAAAACGAGGTTGAATCATGAATGAATCTGAAGATGTACATGGGAATTGTGGGTAATATGGTGATTTGGATCCCAAACAATCCGTTGATGCTCAGTTTGACTCTTCCTGTTACATGGATGATGAAGAATTGATGAAGATAAGGAAAAGAACAAGATGGAAATGAGATAAAAAAATAAAAAAAAACATCTGGATGGAGACACACACATGGTTACACTCACGGTATCAGTGAATTGGAACAGCTGATCTCCAGGTGTGTTCTGTGTGTGTGTGTTTTTCAACACTGCACGTTATCGAATCCCCCTGCGGACACGCACACGGCTGACAGACAAGCCCGGCGACAGCGACGCAGCTCGGAGGAAGCAGACACTGCCGTGAGGAAGAGAGAAATGAAGGACATGTCCATCTTCGCCGTTTCCAGAGCTCTGAAGAAAACTGGCGGCGGTCGGCGGTCCGACCCTTCCCCACCTACGACCGCTCCTGCTGGGCTTCGGCCACCAAGGCTGTCCCCTCCCCTACTAAACGCTTCTGGAAAGATCCACACCTCCCTTTGGTGGTTGCTTCATCTGCGCTGTCCCCACACACGCGTCGCGAATAGCTCCGTCCCGCGCCCACTGATCTCTGAAGATCTGACACGAGAGGGATCTCGCTGGCTATTGCAATCTGACAAGATCTGTAATACTTGGGTGATGAATCGTTCCAAACTTTTTGACGATGCTGGCAGCTCGGGGGTGTGCGCATGTGCGAAGCACCGTGATGGGCTAGACACTTCGCGCGCTCCGTCTGGGCAGAAACAGGGGTCGCGCGGGTCTTATCCGCTCAATAAACTACCTCTCGAGCCCTATGCCCTGCCATTGTACACGTCTTCGACAGCTCCATCAGTTTCACGCCACGACTTTTGTTTTGACTTTGATGTGACTCACTTCACCGTGAAAGTGTCCAAACAACGGAAAATCAACTCGACGCTGAGAAAGAAAAAGAAAAGAAAAAAAGACGGGGCTCCAAATTTAACAATGTGACATTCCGCGTGAGTGAAGCGCGTGAGAATAAGCCCTGCGCGCGAGCATTCTCTCCGCCTGTCAGCGCGCGACCACAGTCCGCTTCTTCTCAGACACGGGCGCGCGTTAGATTCTGCATTGTGCAATGGGCCGTGCTGCTGCGTCCCGCGTCCGCCACCCCTGGGCTCATTATAGAGCCTATTCAGAACGGGGTGAACGGATAGGGCCATTTAAAAAGGTGAGCGCGAACCGTATTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000095_03034508_03067922.mRNA True 2132 mRNA 0.46 4 3034270 3069186

Neighbor

gene id symbol gene type direction distance location
CI01000095_02947521_02950293 NA coding downstream 82608 2947013 ~ 2951662 (-)
CI01000095_02829083_02852606 MECOM coding downstream 181664 2827729 ~ 2852606 (-)
CI01000095_02739239_02745228 NA coding downstream 289042 2738654 ~ 2745228 (-)
CI01000095_02730402_02735781 NA coding downstream 296894 2729666 ~ 2737376 (-)
CI01000095_02721425_02727921 MRPL44 coding downstream 306090 2721112 ~ 2728180 (-)
CI01000095_03149700_03152493 NA coding upstream 79471 3147397 ~ 3152846 (-)
CI01000095_03169563_03175213 IRS1 coding upstream 100353 3169539 ~ 3176598 (-)
CI01000095_03249415_03287084 NA coding upstream 180229 3249415 ~ 3287084 (-)
CI01000095_03431721_03434234 NA coding upstream 362514 3431700 ~ 3435196 (-)
CI01000095_03485842_03499188 NA coding upstream 416618 3485804 ~ 3501925 (-)
G310224 NA non-coding downstream 65617 2867504 ~ 2968653 (-)
G310198 NA non-coding downstream 220916 2812286 ~ 2813354 (-)
G310150 NA non-coding downstream 431761 2602310 ~ 2602509 (-)
G310145 NA non-coding downstream 437078 2596839 ~ 2597192 (-)
G309814 NA non-coding downstream 516728 2517319 ~ 2517542 (-)
G310293 NA non-coding upstream 60009 3129195 ~ 3129525 (-)
G310215 NA non-coding upstream 109902 3179088 ~ 3179786 (-)
G310207 NA non-coding upstream 150025 3192098 ~ 3222668 (-)
G309815 NA other downstream 302566 2663330 ~ 2731704 (-)
G309753 NA other downstream 1852512 1178597 ~ 1181758 (-)
G309626 NA other downstream 1946104 1085588 ~ 1088166 (-)
CI01000095_03528759_03538412 NA other upstream 461726 3528463 ~ 3539055 (-)
G311036 NA other upstream 1290475 4357325 ~ 4362626 (-)
G311701 NA other upstream 2079839 5149025 ~ 5154494 (-)
CI01000095_05211660_05234474 NA other upstream 2114407 5211587 ~ 5237234 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location