CI01000095_03169563_03175213 (IRS1)


Basic Information

Item Value
gene id CI01000095_03169563_03175213
gene name IRS1
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000095
NCBI id null
chromosome length 6456983
location 3169539 ~ 3176598 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU352664
ATACAAACATACACGAGCGGTGCCTTGTTTTGGTCTGTTACTGCTTCACAAAATAGAAAACTCAGCGACTTTTGGAGGAACTTATGCAGCTGTTGAAGCGAACTCGAATGAAGAGTAGAAAGCCGCCGCTCCTTCAAGCATCAAGACTCAAAATCTCTCCCCGTTCACCACAAGCCAGACCTCAGAAACTGGACCTCAATAAACTCACTAACCTCATTTTCCAGGACCGCATTATCACCCGGACGCTACCAAAAGCATATGGACAAAACAGATCTCTCAACATCACGTATCCGGACCTCACAAATGCTGGATTCCACTAACCATAAATCTCCGGACTTTTACTATGTGCACCTTTTTAGACATTACCAGACGTTACTGTCCAACTGTTACAGACTCGGTACAAATCAATTTCTGCCATCAAACATGGTAAAATGGCACCTTTTGAGGTGAAGGGCGATGGTACTGCAGTAGTAGTAGTCTCTCAACGATGTTAATATTTATGTAAATGATGGTACACATGTTTTTGGTACAGGGATGCTTTACAAAGCAGCCATATTGTGTTGGGTTTGTACGACAGTCCCCAACAGTGTTGATTGTACTTCGGTACTGCCAGACATTTCCATTACAGATGAGATTACATGTTGCGATCCAGCTCTCAATTAGACACTTTTATACACCCAGTACGGACGACCTCAAACAGCCAGACTTGACCTCAGGACTTTACGAAAGAGTTTACACACACACACTGTGTTTCAGCACTGTGAGCCATGACTGACCTCATGCTGCCAAACACACACTGTGATGTCTGTCAAACCCTCGTTTCATTTCATACCTGCTCAAGTTATATCCTGTTTAATTGT
>CI01000095_03169563_03175213.mRNA
AAGAAGTCCATACTAGCCTACATATGGCTACTATAATTTGAATCAACCATAAAGGAACCTAATCCTAATAAAAAAAACCTTTTTAAACTTAGAAATGTCAGTTTTCACCCAGTAGATTCTTTGAACCCATTAGGATCATTTAGCTAAACTGTAAAAACAAAATGTTTTCAATTGTAGTCAATTAGCTATCCGATTTTCCAGCAGCTGGAAAGAAACCACATTCTACTTTTCATTACACTATACTATGCTACTTTACTATAATTAATCCCATAATAATAATAACAACAATAACAATGTGTACTTCAAAGCTCCTCCGTAATGCAATTACACAACAAGTACACATTGTTCATTTGTCACTATATTTATACATGTAAATAGACAGTAACATGAATACTGCAAAGTATGACCGACTTTCCATTTTACAATAGTGTATTTATAAATAACGGCAGCGCATAGTTACATGGCGTATTTTCAACACCGCCTCTAAATAAAACTTTATAGCGGTGTTTAGCTCGTGAATGAATCGGTGTTTTGAACGAATCTTTTAAGTGAACGAATCGTTCTCCTACTGGCCTCACTGTGTATATGTTGAAACATCAGTGTAAATGAATCTTTTTACTGAAGATTCGAGTCACTGGAATGAATCAAAAATCCCCACCAGTGCATTTGAATCACATGTCTCTCACAGCCCCCTAGGATGATTGACATTAGAACTGTCCAATCAACGAGGTCAGTTCCAAAATAGGCGGGATTCTTAGTTGTATCGTAACAAGCTAGGCTACAACCCCCAGTCTCAACTCCTCCATACAAACATACACGAGCGGTGCCTTGTTTTGGTCTGTTACTGCTTCACAAAATAGAAAACTCAGCGACTTTTGGAGGAACTTATGCAGCTGTTGAAGCGAACTCGGTACGTTTCCGTTGTAAATAACGGTCAGATGCATACTTTGCGCTCGTGCTTTGTGTAATTGCACTTTTGGGATTTTTGCAGACAGCGCTTTGATCTCCGGGGTAAATGGGGTCGTCGTACGCTGCTGACTGCGCTTGTTTTGATAATGCATTCGGATCTCCGGACTAAAAAGGACACTGTTTTGTAACTTTCACTGTTTTGTATTTTTGTACATCATAAACTTGGTGCTTTTCGGTACTTGCAATATTCTTTGAGGATGCCCGATGGATTATTTAAACTTAGTTTTAACAATGTAATGCTGCTGAGGAAACTGTTATAATTGAAGCTTTTGTCGGTACGCACAAAAGTGACTTGTTTGAGTGCTATTTTTCTATTTTTACTTAATGGAAACCCAGCGTTCACATTTGACGAAGATTACATGCATAACGCTTTGACTTTCAATCCTGCAATTTTTCCATAAATTATTTTTTATACCATGGCAAGCCCGACCACGGAGCAAGGATGTTTTTCGGACGTGAAAAAGGTGGGTTATTTAAGGAAACCCAAAAGCATGCACAAAAGGTTTTTTGTACTGAGGGCGGCGAGCGCCTCCGGACCGTCCCGACTGGAGTACTACGAAAACGAGAAGAAGTGGAGACACAAGTCTGGAGCACCGAAAAGGTCCGTTCCGCTGGAGAGCTGCTTTAACATCAACAAAAGAGCGGATTCTAAAAACAAACATCTCGTCGCGCTTTACACCAAGGATGAGTACTTTGCCATCGCTGCTGACAGCGAGTTAGAGCAGGAGTCATGGTATCAAGCCCTGGTTGATCTTCATAACAGAGGTAAAGTCCACGAAACTGCCGCGGGCCGTGGAATTGGCGAGGATAATTACGGGGAAGCCACGCCGGGACCTGCCTTCAAAGAGGTTTGGCAGGTTATTTTGAAACCAAAGGGTCTGGGTCACATAAAAAACCTGATTGGCGTTTACAGATTATGCCTCACTAATAAGACTATCAGTTTTGTGAAACTCAATTCAGATGCGGCCGCAGTGGTCCTGCAGTTGATGAACATTAGAAGATGTGGTCACTCTGAAAATTTCTTTTTCATTGAAGTTGGGAGATCTGCCGTGACAGGACCCGGGGAGTTTTGGATGCAAGTTGACGACTCAGTCGTGGCTCAGAACATGCATGAAACTATATTAGAAGCCATGAAAGCCATGAGTGAGGAGTTCAGACCCCGCAGCAAAAGTCAGTCATCTTCCAACTGCTCAAACCCCATCTCAGTGCCTGTCAGGAGGCATCATCACAATAATCCTCCCCCCAGTCAGGTTGGCTTAGGCAGGCGCTCCCGGGCCGAGAGTGTGACAGCCACTTCTCCTGTTAGACCCGGCAAACACAGCCATTCATTCAGAGTGAGAGCGTCCAGTGATGGGGAGGGCACCATGTCCAGGCCGGCGTCCGTTGATGGGAGTCCGAGCACAGCCCGACCTCAATCGCAGCGACACAGGGGTGGATCCAGACTTCACCCTCCGCTCAATCACAGCAGATCAATCCCCACGCCCACCTCGCGGTGCTCCCCCTCAGCCATCAGCCCCGTCAGCCTGTCTTCCAGCAGCACCAGCGGCCACGGATCCACGTCTGACTGCCTCTTTCCACGCCGCTCTAGCGCCTCAATATCTGGATCGCCCAGTGATGGCGGATTCATTTCCTCTGATGAATACGGATCTAGCCCCTGCGACTTTCGAAGCTCCTTCCGTAGCGTGACTCCGGACTCGCTTGGCCACACACCGCCTGCTAGGGAGGAGGAGATAAACAACTACATCTGCATGGCCAAGCCCGGTTCACTTCCTGGCACCGGGAGCCAATCGCGAAGCCAATCCAGAGGAACGCCATCAAGACTAGAGGAGCCCGAGTTGGAAAAATGTTTCCGGAAACGAACGCATTCTTCTGGTGCATCGCCGCCAACTCCGTGCCATCAAAAGACTCCTTCGCAGTCGTCTTCCGCATCGCTGGAGGAGTATACTGTAATGATGCCGGCATACCCACGAAGCCGCACTGCATCGTCATCATCGTCAACGCACAGGCACTCATTCATGCCTACCCATTCATACCCAGAGGAAGGTATCGATACGTCACAAGCAAAAGACCACAGTCGACCAGATCACAAAGATGACGGCTACATGCCCATGCAGCCAGGCGTTGCACCTGCGACCCCAACGGTGAAAAGTGGTGACTACATGCCCATGAGTCCAAAAAGTGTTTCTGCACCACAGCAAATTATCAACCCCCGGCAACACTCGCATGTTGACTCCAATGGTTACATGATGATGTCACCAAGTGGCAGCTGCTCTCCAGATGGCACAACAAACTATGGCAAGATCTGGACTAATGGCATCAACCCTAAGCTGTCCATGGAGAGTATGGAAGGTAAAGTGTCATCTTGTGGAGATTACATAAACATGTCCCCGGCTAGTTGTTCAACGACTAGTACGCCTCCAGACTGCTTTTTCAACCCTGTAGAAGACCCTCCCAGGCCAATGTATGCTTACTTCTCTTTGCCCCGCTCCTTCAAACACGCCAACAGGAAGCAGGACCAGAGCCCTCTCCGGATATCACTGGGCTCTAACCGATTGCCGTACGCAGACTCTTCCTCGTCTTCCGCGAGCAGCGACAGCTTGGGTGGTCAAGGCAACTCGCAGCAGTCTGCTGTCAAACCCAAAAGGTCAGAGGGCAACAGTAGGCTGACACGGCCAACACGGCTGTTATTGGATGCTAGCAAAGCAAGTACTCTCCCACGAACACGTGAGAGTCCCTTCCCTGCAGAGCCCAAAAGTCCTGGCGAGTATGTCAACATTGAGTTCAACGACAAGCCATTATCAGCAAGCTTAGCATCGCTGTTCCCACCTGTGTTTTCCGGAAGTGATGCTGACGCCCAGTCAGACCTTTCATCATCTGAGTACATGAACATGCAGCCGGGGTCACAGGCCAGGCGGTTGTGCCCAGAAATGCAGATTTCCACTTCCTGTTCAGATTATGCCATCATCAACCCATCAAACTCTGAATCCTCCCCTCCGCTGCCCTGTGAGAGCATATGCAACCGTGACTACATCAGCATGCAGTTAGCATCCTGCACTAGCTTTCCTAATACAGAAATGATGCTGATGACTGAGGCCTTGCCAGATGCGGATGCCCCTCCTTGTTCTGTATCACCCAATCATGGGGTGACAGTGTTAAGCGGTGCCCCAGGAAGACCAGCTCTGATGGGCCCTTTGTCAGGTCTTAGTGCATTCACACGGGTTAACTCCACTTCCGGGTGGAACCAGGGGGCTAAAGTAATCCGGGCTGACCCACAGGGTCGACGGAGACACAGTTCAGAGACTTTTGCCTCCACGACACCAAGAGGGTCAGTTGACACATCAGCCACCTGTCAGTCAGGTGATGTAAAGCGCCACAGCTCCGCCTCTTTCGAGAATGTATGGTTAAGACATGGTGAGGCCTCTGCTGCTTCTACCGCTCCTCCTGCATCTACAGTAACCAACGGACGAAGGGAAAACACTTCAGGCCCAGTTCCCGTGTTAACAAACCATGACCAGAACGGCCTGAACTACATCGATCTGGATCTAGTGCAGAATGGAGAGCAGCATGTTCCAGACTGGAATGCTTTCCAATCTCGGCCAGTGGAGCTGGAAGCCGTGGAAGTTATAGAAGAGCTCAGTGCCTACGCCAGTATAAACTTCAAGAAATCAGATGAGACCAGAGGGAATCTCGCACACAGAGAAGTAAAACCCACTGTGTTTCTCTGGAGACTAGAGCTGTGATGATTTTACCACAGCAGCAATAAA

Function

symbol description
irs1 Predicted to enable insulin receptor binding activity and phosphatidylinositol 3-kinase binding activity. Acts upstream of or within cellular response to hypoxia. Predicted to be active in cytosol and plasma membrane. Is expressed in several structures, including digestive system; endocrine system; kidney; nervous system; and pharyngeal arch. Human ortholog(s) of this gene implicated in Alzheimer's disease; coronary artery disease; and type 2 diabetes mellitus. Orthologous to human IRS1 (insulin receptor substrate 1).

NR:

description
unnamed protein product

GO:

id name namespace
GO:0008286 insulin receptor signaling pathway biological_process

KEGG:

id description
K16172 IRS1; insulin receptor substrate 1

RNA

RNA id representative length rna type GC content exon number start site end site
TU352664 True 106 lncRNA 0.43 1 3175689 3175794
CI01000095_03169563_03175213.mRNA False 4733 mRNA 0.48 2 3169539 3176598

Neighbor

gene id symbol gene type direction distance location
CI01000095_03149700_03152493 NA coding downstream 16693 3147397 ~ 3152846 (-)
CI01000095_03034508_03067922 NA coding downstream 100353 3034270 ~ 3069186 (-)
CI01000095_02947521_02950293 NA coding downstream 217877 2947013 ~ 2951662 (-)
CI01000095_02829083_02852606 MECOM coding downstream 316933 2827729 ~ 2852606 (-)
CI01000095_02739239_02745228 NA coding downstream 424311 2738654 ~ 2745228 (-)
CI01000095_03249415_03287084 NA coding upstream 72817 3249415 ~ 3287084 (-)
CI01000095_03431721_03434234 NA coding upstream 255102 3431700 ~ 3435196 (-)
CI01000095_03485842_03499188 NA coding upstream 309206 3485804 ~ 3501925 (-)
CI01000095_03508757_03510876 NA coding upstream 332065 3508663 ~ 3510966 (-)
CI01000095_03511710_03521880 NA coding upstream 334539 3511137 ~ 3521945 (-)
G310293 NA non-coding downstream 40014 3129195 ~ 3129525 (-)
G310250 NA non-coding downstream 91534 3052698 ~ 3078005 (-)
G310224 NA non-coding downstream 200886 2867504 ~ 2968653 (-)
G310198 NA non-coding downstream 356185 2812286 ~ 2813354 (-)
G310215 NA non-coding upstream 2490 3179088 ~ 3179786 (-)
G310207 NA non-coding upstream 42613 3192098 ~ 3222668 (-)
G310321 NA non-coding upstream 53035 3229633 ~ 3229895 (-)
G310322 NA non-coding upstream 55509 3232107 ~ 3232332 (-)
G310319 NA non-coding upstream 59403 3236001 ~ 3237499 (-)
G309815 NA other downstream 437835 2663330 ~ 2731704 (-)
G309753 NA other downstream 1987781 1178597 ~ 1181758 (-)
G309626 NA other downstream 2081373 1085588 ~ 1088166 (-)
CI01000095_03528759_03538412 NA other upstream 354314 3528463 ~ 3539055 (-)
G311036 NA other upstream 1183063 4357325 ~ 4362626 (-)
G311701 NA other upstream 1972427 5149025 ~ 5154494 (-)
CI01000095_05211660_05234474 NA other upstream 2006995 5211587 ~ 5237234 (-)

Expression


Co-expression Network