CI01000095_03485842_03499188


Basic Information

Item Value
gene id CI01000095_03485842_03499188
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000095
NCBI id null
chromosome length 6456983
location 3485804 ~ 3501925 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000095_03485842_03499188.mRNA
AGTTTAAAATCAAACAAATAATCAAACAAATGCACAAAACTACTTAAGGCAAAATTTATTACTTGAATTTATTAAAAATAAATATAACAAGTGAAAGGGATGTCCAAAGGCCAAAATAACAAACAAAACAAATCTAGAAAGGAAAAGAGGGAGGGATTAAATAACCTAAGTAAATATAAAAATAAAATACATTTACCTTCCCTAACGAAAAACAAAGTACAAACCAAGTTACCAAAATAAATAGGCAGGACACCCCTACGCTCCATGTTCTTGAAATATAACTTTAGGAACAGTTGAACATGATAAACAGGTTGTACAATCGGTACACTTTCACTTGGAAGTAACAAGTTTGATAATCGGCCGGAGGAGGGATCCAGGAGCTCTCAACCCAAATGCGGCCGAACCAAGAATGAGCTCCCTGTTGAACGCCGGCAGCATCCTTATAAAGACCACGCCTCTTCTGAACCGCCAATAGAGAGAGTGTACACCATCATTGGACAACCTATTAGAACACTGACAGAACAAGAGGGAAAAGAAAAAAAACAACACATACCAAATACAAGAACGCAGGTCGTAACAAGCATGAATTACCCTGGACATTATTTAATATAACTTCGAATGTATTCGTCTGTGAGAAGAATGTCATATACACCTAAGATGGCTTGAGGGTGAGTAAATCATGGAGTAATTTTCATTTTTGGGTGAACTATCCCTTTAATTTTCGTAAGTGTTCACAATGGTTTGCAATGCAAGCTAGTTGCAATGTGTTGTTTAGCTAACTTTTTATACATGAAAATAAAACTAGCGAATAATACAAATTTACAAAATAATGTTTTAATGTATATATATATATAATGTATAATGTTTTATACAACTTAGTGTAACTTTTAACAGTTAGAAAACTGCGTGCATGTGACGTCACTTTGAGGCGGAGCAATTCGCTTCCTTCTAAGTCCATTTGGTCTGATGCCTTTTTGTCCAAGTCCGAGTCTGTTTAGTATGATGCCTAATTGTGCGAGACCAGACACCTGACATCATTTTTCCTGAAGCCTGAAGCCTTTAGGCCTTTAGGTTCTAAATAAACATCACACAGGATCAAGTTCTCCATAATCTACTGCCTGTGGTTGAAGCATACAGATTAGTACAGCAAGTGAACAGCTCTTTCACATTATGAACACAATAATAAAGTAAGTCTGCATTTTGTGCTAAGAATATGTGAAGACATGTTTATAGAGCTTCTAAACCACATGGATCTGTGTGATTGACAGTCTACGTGTATATGGGTTGTATATGTTTACATGAAGTAATGCCCTGCAGAATGACTTGCTATACTTTTTCTAAAACAAGTTTGGACATTTTAAAATCATATTTAAAATGTATATTTTAATAATAATGTATAATCTCATATTTAGATCCTTTGTGCTTACATGTGTCTGTACAGATGTGTGCATTTGACTAGAACTCATTAATAAAAGCATTAAATTGTATTTCCTGGTGCCATTAAAGCATTGATATTTTATTGAAAAGCTGCAGGTTCAGAGTATTTTTTCATAAATTGATGAGTACATAAAAAAATGAATGCACAAAAGTGATCTTATTTTATGCTATTTCATGCATTCTGACATATTTACACTGTTAAAGAGTTGCATTCTCTTGCTAAAAGTTTGGCCAAAGTTTCAAAACACGAGTTGGACGTATAACAGAGTATTTCTCTGCAAATATACTCCTTCAGATTTCCTACATGTTTCAGAGAGTTTTTTTCCGAGTATGGCCCTGTATTACGTAATAAAGGGTGGAATTCCTTGTATGGGCATTTCTCCCAGAAGAGTGCGCACACACATCAACCAGAGCGAGAGAGCAAGAGCACGCCCATCAATGTGCTTTGTTCGGGTTACGGAAGTTGTCGGCAGCCCTGCACAGGACTTGCTCAAGAAAGATTTGTCACTTTGTTTTTAGACCACGGAATTAACAATGTCACCAAAGAAGTGTGTTTTTGGTTGTGAGGGAAAGATAACCTTGCTTCCCAAAGAACCCAGTGGAGCTGAGAGATTTGTGCATCACGCATTACATTGATGCGCTCTTGACATTTGTCATTTAAATATCCATAGAAACTGCCTTAAATTAACTATCAAAATAAGGGTAAAGTCATGTCTGAAAGTTGCAATCACTTTTTTATTGGTTAAAATGAATGGAGAATATCTCGTGTTTTTACGTGGCTGCTCGAGCCTTCAGGATCGGCGCTTATGATGGTTTTATAAACAAGGCCCAGTTCGACGCTGGATTTACAGATTGTTTGAAACTGAAAGATGGAGCGGTCACAGCAGTAAAAGATCCCGGTCATGAGTAGGAAACCGCAGGTGGTTAGTTAAACTGCTTCAAATGTCTGTTTTGTTGGCAGTCGGCGCGTAAGTGCATATAATGTAAACAACACCAATCAAAAGTTATCCAGGAATAATGCGATGGTGTATTGTATGTGTTTAAATAAATTTGTTTAGCTGACCATTGATAGCTTCGCTACGCAAAAGCTGCAGGTGCCTGTCACTCTTTAGCGTCGCCCATGGCATGCCTACAGGAGCACGGCTGTTTTCGGAAAGACTCGGTACAGCGTATCTTTCTTTTATAAATCTGATAAAACTAAAGACTTTTCGGAGATGTGAAGGATGATATACTACTCTATAGGTACTCAAGATTAACATGAGATTGGCCGAAACTGTGTGTGTTATGTACCTTTTAAAGAATGTCCCATTGTTATTTCTGCAGACTGAGATTGTGTAACTTGTCAAATGAAGGTTGTGCAGCTCTAACTTCAGCTCTGAGATCAAACCCCTCACACTTGAGAGAGCTTGATCTGTCTGAGAATGAATTCGGAGATGCAGGCATACAATTTCTCTCTGATGGACTCAGGAATCCTCTTTGTAACCTGAAGATATTATGGCTGAGGGAGTGTGATATATCAGATGAAGGTTGTGCTGCTCTGGCTTCAGCTCTGACATCAAATCCCTCACACATTAAAGAGCTGGATCTGTCTAATAATAAACTCACAGAGACAGGCACTGACCTGCTCACTGCAATAAAGTTCAATCCACACTATAAACTGGAGAAATTACAAAGCTCAGTGCAGATGGGGAGATCTTCTCCATGTCCTAGCCATGAATCAATGAGGAGTGATATGTCAATGAATAATCCATTGGATTTAAAAGAATCCAGTAATGCCTCACTCCTCAAATTAAATCTGAGGAGCATTTTCCAGTGTTTGCGTGAAGGGATGTCAAAAAACAGTGCCCTCATACCTCTCAATGAGATTTACACTGAGCTCTACATCACGGAAGGTGGAAGTGGAGTGATCAGTAATGAACATGAGATCAGATGGATTGAAACTGTGTTTAGGAGAAGAATGACAGAAGATACTCAAATCAACCTGAATGACATATTCAAACCCTTACCTGGACAAGATCAACCCATCAGAACTGTGCTGACTAAAGGAGTTGCTGGCATTGGAAAAACAGTCTCTGTGCAGAAGTTCATTCTGGACTGGGCTGAAGGGAAAGCAAATCAAGACATCTATCTCATATTTCCACTTCCTTTCAGAGAGCTCAATTTGCTGAAGGACCAAACATACAGTCTTAAAGATCTTCTACATTTTTTCATGGGCATAAAACAACTGGAAATCTCTCCAAATGAAGGTAAAATCATTTTCATCTTTGATGGTTTGGATGAGTGTCGTCTGTCTCTGGATTTTCAGAACAACGTGAGGTTGTGTGATGTGACTAAATCAGCTTCAGTGGACGTGCTGCTGACAAACCTCATTGTGGGGAATCTACTTCCCTCTGCTCTCATCTGGATCACCTCCAGACCAGCAGCAGCTGATCTCATCCCCTCTGAGTGTGTTGATCGAGTGACAGAGGTACGAGGCTTCAGTGACCCACAGAAGGAGGAATACTTCAGGAAGAGAATCAGAGATCAGAGTCTGGCTGAACAAATCATCTCACACCTGAAGTCATCGGGGAGCCTCTACATCATGTGCCACATCCCAGTGTTCTGCTGGATCTCAGCCACTGTCCTAGAAAAGATGTTGAGTGGAGCAGAGAGTGGAGAGATTCCCAAGACTCTCACTCAAATGTACACTGACTTCCTGATCCTTCAGACTAACATCAAACATGAGAAGGACTATGAGAAGAAAGTGAAACCCGAGGACATGATTCTCAAACTGGGTAAACTAGCTTTTCAGCAGCTGGAGAAACAGAATCTGATCTTCTACGAGGACGATCTTAGAGAATTTGGCATTGATGTGCAAGAAGCAGCTGTGTACTCAGGATTGTGCACTCAGATCTTCAGGGAAGAATCAGGGCTGTTTCTGGAGAAAAAAGTCTACTGCTTTCTTCATCTGAGCGTTCAGGAACATCTAGCAGCTTTATATGTGCACCTTTCCTTTGTGAATCAAAACACAAATGAATTAGACCAACCAGGTATTCTACTCAAATTTCTGCCTTGTGCTGCACAAAGTTCAATATTTGACCTCCACCAGAGTGCTGTTAAGAAAGCTCTGCAGAGTACCAGTGGACATCTGGACCTTTTCCTTCGTTTCCTTTTGGGCATGTCACTGGAGTCCAATCAGACTCTCTTACAAGGCCTACTGACACAGACGGAAGGCAGCTCTGACGACAAAGAGCAAATAGTTAAGTTCATAAAGGCGAAGATCAAAGACAATCCTCCTACCGAGAAATTAATCAATCTGTTCCACTGCCTGAACGAACTGAATGATCATGACCTAGTGGAGGAAATACAGCATTATCTAAAATCTGGGTCAAGAATAAATACCACACTGACAGCCTCGCAGTGGTCAGCAGTGGTCTTTGTATTACTGACCTCGGGGCAAAAACTAGATGTGTTTGATTTAAATGAATACATCGGGACACTCGTCTTGGCAGATGAATGTCTTCATAGGCTACAGCCGGTGCTTGAAGCATCCAGAACTGCAATGTATGTCATGCTAGTGACTTCATGTCTGAAAGAGTTGAACCTGGCTAAAAGTAATGTAAATGAGTCAGAACTGAAGCAACTCTGTGCTGGACTGGGAAATCCTCAGTGTCAATTGGAGAGACTGAGACTGGAGTCTTGTGGTATTTCTGATAAAGGTTGCACTTTTCTGGCTTTGGCTCTGAGATCAAACCCCTCACATTTAAAAGAGCTGGATCTGTCCAAAAATAAAATCAGTAACTCTGGATTGAAGATTCTTTCTGCTGAATTGCAGAATCCTCTTTGTAAACTAGAACTACTGTGGATGAGACTTTGTGGTGTCACAGATGAAGGTTGTGCTTCTCTGGCTTTGTTTCTGAAATCAAACCACTCACACCTAAGAGGACTGAATCTGTCTGGGAATAAACTGGGAGATTTGGGAATTAAAAACCTCGCTGATGGACTAGAGAATCCTCACTGTAAGCTGGAGATACTGAGATTAAACAATTGTGACATCACTAGTGAGGGCTGCGCTGCTCTGGCTGAAGTTTTGAAATCACATCCTTTAAGCCTGAGAGAGCTGGAACTAGGTTGGAATAAACTGGGTGACTCGGGTGTGCAGCCACTCTTTGCTGCATTGGAGAATCCAAACTGTAAATTGAAAGTTCTGCGACTGAGAGATTGCAAAATTGCAGAGGAAGGTTGTGATGCTCTGGCTTCAACACTGAAATCAAACCCCTCACACCTGAGAGAGCTGGATCTTTCTCAAAATAAACTGAGAACCTTATGGGTGAAAATGCTCTGTACTGCTCTGGAAAAGCCTGACTGTAATCTGGAGATACTGCGTTTGGAATATTGTGGTCTCACAGATGAAAGTTGTGCTGTTCTGGCATCAGCTCTAAGATCAAACCCCTCACACCTGAGAGAGCTGGATCTGTACATGAACAACCTCGGAGATTCAGGAAGGCAGCTGTTGTCTGCTCTGAAGGATGACCCAAACTTTACACTGCAAAAACTACAACTGCAAACGCTGCAATATTAATCACATCATTATTCGTAGATACCCCGTTTTTAAATAAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000095_03485842_03499188.mRNA True 6036 mRNA 0.40 10 3485804 3501925

Neighbor

gene id symbol gene type direction distance location
CI01000095_03431721_03434234 NA coding downstream 50608 3431700 ~ 3435196 (-)
CI01000095_03249415_03287084 NA coding downstream 198720 3249415 ~ 3287084 (-)
CI01000095_03169563_03175213 IRS1 coding downstream 309206 3169539 ~ 3176598 (-)
CI01000095_03149700_03152493 NA coding downstream 332958 3147397 ~ 3152846 (-)
CI01000095_03034508_03067922 NA coding downstream 416618 3034270 ~ 3069186 (-)
CI01000095_03508757_03510876 NA coding upstream 6738 3508663 ~ 3510966 (-)
CI01000095_03511710_03521880 NA coding upstream 9212 3511137 ~ 3521945 (-)
CI01000095_03528759_03538412 NA coding upstream 26538 3528463 ~ 3539055 (-)
CI01000095_03544585_03545168 NA coding upstream 42526 3544451 ~ 3545407 (-)
CI01000095_03554228_03557044 NA coding upstream 52263 3554188 ~ 3557177 (-)
G310759 NA non-coding downstream 3173 3482430 ~ 3482631 (-)
G310385 NA non-coding downstream 110955 3374432 ~ 3374849 (-)
G310384 NA non-coding downstream 113798 3371806 ~ 3372006 (-)
G310319 NA non-coding downstream 248305 3236001 ~ 3237499 (-)
G310322 NA non-coding downstream 253472 3232107 ~ 3232332 (-)
G310777 NA non-coding upstream 71695 3573620 ~ 3641059 (-)
G310782 NA non-coding upstream 82452 3584377 ~ 3590766 (-)
G310857 NA non-coding upstream 380889 3882814 ~ 3882971 (-)
G310862 NA non-coding upstream 390433 3892358 ~ 3892703 (-)
G310918 NA non-coding upstream 493471 3995396 ~ 3995706 (-)
G310207 NA other downstream 263136 3192098 ~ 3222668 (-)
G309815 NA other downstream 754100 2663330 ~ 2731704 (-)
G309753 NA other downstream 2304046 1178597 ~ 1181758 (-)
G309626 NA other downstream 2397638 1085588 ~ 1088166 (-)
G311036 NA other upstream 857736 4357325 ~ 4362626 (-)
G311701 NA other upstream 1647100 5149025 ~ 5154494 (-)
CI01000095_05211660_05234474 NA other upstream 1681668 5211587 ~ 5237234 (-)
CI01000095_05604829_05607020 NA other upstream 2104288 5603542 ~ 5607020 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_009412 si:dkey-23k10.2 coding NC_007126.7 CM002899.2 36329368 ~ 36347895 (-)